Doc-Alignment

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Cucurbitales genomes. We used V.vinifera as a reference, and by comparing homologous gene locus maps and Ks values between V.vinifera and other Cucurbitales, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We created a hierarchical lists of homologous genes using V.vinifera as a reference.
  The relevant gene ids can be obtained from the Cucurbitales blast and match under the Tools module. This link is Cucurbitales blast and match.

Orthogroup analysis platform
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Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g156 . Blo15g00378 Bda06g00479 Bda08g00994 Bpe07g00717 . Bma05g00364 . Cmo19g00744 . . . . . Sed05g2220 . Cpe15g00589 Bhi05g01719 Tan02g0689 Cmetu01g0544 . . . . Cla02g00432 Cam02g0440 Cec02g0438 . . . . . . Cone3ag0957 . . Csa07g00095 . Cme01g01266 . . . . . Bpe05g00286 . . . . . . Cma19g00736 . Car19g00565 . . . . . . . . . . . . . . . . . . Chy01g00684 .
Vvi3g157 . . . Bda08g00993 . . Bma05g00365 . . . . Cma20g00753 . Car20g00654 . . . . . . . . . . . . . . . . . . . . . Lsi10g00493 . Chy11g00257 . . . . . . Bpe05g00287 . . Sed05g3488 . Cmo20g00749 . . . . Cpe16g00316 . Bhi10g01853 Tan05g1140 Cmetu11g2130 . Hepe08g0291 . . . . . . . . . . Csa02g01390 . Cme11g00382
Vvi3g158 . . . . . . Bma05g00366 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi10g00494 . Chy11g00256 . . . . . . Bpe05g00288 . . Sed01g0196 Cmo02g00254 . . . . . . Cpe05g01373 Bhi10g01852 Tan05g1137 Cmetu11g1470 . Hepe08g0292 . . Cla02g01166 Cam02g1244 Cec02g1253 Cco02g1294 Clacu02g1226 Cmu02g1193 Cre02g1505 . Csa02g01391 . Cme11g00381
Vvi3g159 . Blo15g00379 Bda06g00478 . Bpe07g00716 . . . Cmo19g00745 Cmo11g01736 . . . . Sed04g3854 Cpe04g00588 Cpe15g00590 Bhi05g01717 Tan02g0688 Cmetu01g2289 . Hepe02g0427 . . Cla02g00431 Cam02g0439 Cec02g0437 Cco02g0455 Clacu02g0440 Cmu02g0435 Cre02g0769 . . . . . Csa07g00096 . Cme01g01265 . . . . . . . . . . . . Cma19g00737 . Car19g00566 . . . . . . . . . . . . . . . . Lsi11g01197 . . .
Vvi3g160 . Blo15g00380 Bda06g00477 Bda08g00992 Bpe07g00715 . Bma05g00367 Bma12g00919 . . Cma02g00258 Cma20g00752 . Car20g00653 . . . . . . . . . . . . . . . . . . . . . Lsi10g00758 . Chy11g00254 . . . . . . Bpe05g00289 . . . Cmo02g00255 Cmo20g00747 . . . . Cpe16g00317 Cpe05g01372 Bhi10g01849 . . . . . . Cla02g01167 . . . . . . . Csa02g01393 . Cme11g00380
Vvi3g161 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi3g162 . . . . . Bpe12g00121 . . Cmo19g00747 Cmo11g01739 Cma02g00259 Cma20g00750 . . Sed05g2217 Cpe04g00591 Cpe15g00593 Bhi05g01716 Tan02g0684 Cmetu01g2682 . Hepe02g0426 . . Cla02g00428 Cam02g0437 Cec02g0435 Cco02g0453 Clacu02g0438 Cmu02g0433 Cre02g0767 Cone12ag1231 Cone8ag1283 . . Lsi10g00496 Csa07g00098 Chy11g00253 Cme01g01263 . Blo13g00504 Bda15g01034 . Bpe15g00814 . . Bma08g00751 Sed01g0194 Cmo02g00256 Cmo20g00745 Cma11g01382 Cma19g00738 . . Cpe16g00318 Cpe05g01371 Bhi10g01847 Tan05g1133 Cmetu11g0608 . . . . Cla02g01088 Cam02g1164 Cec02g1164 Cco02g1213 Clacu02g1156 Cmu02g1118 Cre02g1421 Lsi11g01199 Csa02g01394 Chy01g00682 Cme11g00379
Vvi3g163 . . . . . . . . Cmo19g00748 Cmo11g01740 . . . . Sed06g0381 Cpe04g00592 . Bhi05g01715 Tan02g0682 Cmetu01g1199 . Hepe02g0425 . . Cla02g00427 Cam02g0436 Cec02g0434 Cco02g0452 Clacu02g0437 Cmu02g0432 Cre02g0766 Cone12ag1232 . . . . Csa07g00100 . Cme01g01262 Blo04g00567 . . . Bpe15g00813 . Bma03g00609 . . . . Cma11g01381 Cma19g00739 . Car19g00568 . . . . . . . . . . . . . . . . Lsi11g01200 . Chy01g00681 .
Vvi3g164 . Blo15g00381 Bda06g00476 . . Bpe12g00122 . . Cmo19g00749 Cmo11g01741 . . . . Sed05g2215 Cpe04g00593 Cpe15g00594 Bhi05g01712 Tan02g0681 Cmetu01g1192 . Hepe02g0424 . . Cla02g00426 Cam02g0435 Cec02g0433 Cco02g0451 Clacu02g0436 Cmu02g0431 Cre02g0765 Cone12ag1233 Cone8ag1286 . . . Csa07g00101 . Cme01g01260 Blo04g00568 . Bda15g01033 Bda14g00616 Bpe15g00812 . . . . . . Cma11g01380 Cma19g00740 . Car19g00569 . . . . . . . . . . . . . . . . Lsi11g01201 . Chy01g00680 .
Vvi3g165 . Blo15g00383 Bda06g00475 Bda08g00991 Bpe07g00713 Bpe12g00123 Bma05g00370 Bma12g00918 Cmo19g00750 Cmo11g01742 . Cma20g00749 . Car20g00650 Sed05g2214 Cpe04g00594 Cpe15g00595 Bhi05g01710 Tan02g0680 Cmetu01g1717 . Hepe02g0423 . . Cla02g00425 Cam02g0434 Cec02g0432 Cco02g0450 Clacu02g0435 Cmu02g0430 Cre02g0764 Cone12ag1234 Cone8ag1287 . . Lsi10g00497 Csa07g00104 . Cme01g01259 . Blo13g00503 Bda15g01032 Bda14g00617 Bpe15g00811 Bpe05g00290 Bma03g00610 Bma08g00750 Sed01g0190 . . Cma11g01379 Cma19g00741 . Car19g00570 Cpe16g00319 . Bhi10g01845 Tan05g1129 Cmetu11g0473 . Hepe08g0296 . . Cla02g01170 Cam02g1249 Cec02g1259 Cco02g1297 Clacu02g1230 Cmu02g1196 Cre02g1513 Lsi11g01202 Csa02g01395 Chy01g00679 Cme11g00378
   
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Gene_GFF

Select Chromosome Start End Strand Old_gene Gene Num
6 6811551 6812486 - Bda023720.1 Bda06g00475 475
6 6815759 6816226 + Bda023721.2 Bda06g00476 476
6 6819055 6821825 - Bda023722.1 Bda06g00477 477
6 6824690 6825377 - Bda023723.1 Bda06g00478 478
6 6827521 6835510 + Bda023724.1 Bda06g00479 479
8 20209386 20210393 - Bda029666.1 Bda08g00991 991
8 20234896 20237650 - Bda029667.1 Bda08g00992 992
8 20250569 20262519 - Bda029668.1 Bda08g00993 993
8 20263263 20267343 + Bda034035 Bda08g00994 994
14 4646864 4647178 - Bda027371.1 Bda14g00616 616
14 4650435 4651401 + Bda027372.1 Bda14g00617 617
15 19302349 19302744 - Bda013017.1 Bda15g01032 1032
15 19307297 19307710 + Bda013018.1 Bda15g01033 1033
15 19309024 19309818 - Bda013019.1 Bda15g01034 1034
5 55393737 55395191 - XM_039032357.1 Bhi05g01710 1710
5 55477542 55479528 + XM_039031072.1 Bhi05g01712 1712
5 55539166 55541451 + XM_039031885.1 Bhi05g01715 1715
5 55542173 55545167 - XM_039031886.1 Bhi05g01716 1716
5 55552600 55554824 - XM_039031418.1 Bhi05g01717 1717
5 55624443 55629581 + XM_039031504.1 Bhi05g01719 1719
10 45955153 45956624 - XM_039046124.1 Bhi10g01845 1845
10 46005418 46007733 - XM_039046042.1 Bhi10g01847 1847
10 46016967 46020961 - XM_039046141.1 Bhi10g01849 1849
10 46040956 46044117 - XM_039046218.1 Bhi10g01852 1852
10 46065980 46071235 - XM_039044989.1 Bhi10g01853 1853
4 4882849 4884996 - BLOR13479 Blo04g00567 567
4 4897653 4898634 - BLOR13480 Blo04g00568 568
13 26349883 26350856 - BLOR05784 Blo13g00503 503
13 26366752 26371614 - BLOR05785 Blo13g00504 504
15 5264100 5271227 - BLOR06772 Blo15g00378 378
15 5286804 5287495 + BLOR06773 Blo15g00379 379
15 5291273 5294045 + BLOR06774 Blo15g00380 380
15 5309577 5314957 - BLOR06775 Blo15g00381 381
15 5350480 5351426 + BLOR06777 Blo15g00383 383
3 5010510 5012784 - Bma030980 Bma03g00609 609
3 5022229 5022789 + Bma016900.1 Bma03g00610 610
5 11328119 11335188 - Bma031182 Bma05g00364 364
5 11335929 11340022 + Bma021177.2 Bma05g00365 365
5 11342009 11343983 + Bma021178.1 Bma05g00366 366
5 11514004 11516551 + Bma021181.1 Bma05g00367 367
5 11668929 11669918 + Bma021188.1 Bma05g00370 370
8 43957737 43958132 - Bma028125.1 Bma08g00750 750
8 43963890 43964684 - Bma028126.1 Bma08g00751 751
12 40684957 40685898 - Bma008251.1 Bma12g00918 918
12 40710939 40713668 - Bma008253.2 Bma12g00919 919
5 16043882 16047897 - Bpe017700.1 Bpe05g00286 286
5 16047669 16051736 + Bpe025803 Bpe05g00287 287
5 16053690 16055656 + Bpe017701.1 Bpe05g00288 288
5 16089315 16091642 + Bpe017702.2 Bpe05g00289 289
5 16121825 16122883 + Bpe017704.1 Bpe05g00290 290
7 13732575 13733509 - Bpe021557.1 Bpe07g00713 713
7 13742928 13745702 - Bpe021559.2 Bpe07g00715 715
7 13748406 13749098 - Bpe021560.1 Bpe07g00716 716
7 13751661 13754913 + Bpe021561.3 Bpe07g00717 717
12 869576 870370 + Bpe005361.1 Bpe12g00121 121
12 871640 872468 - Bpe005362.1 Bpe12g00122 122
12 875738 876726 + Bpe005363.2 Bpe12g00123 123
15 18270549 18271559 - Bpe001737.1 Bpe15g00811 811
15 18274931 18275311 + Bpe001738.1 Bpe15g00812 812
15 18277246 18279581 + Bpe001739.1 Bpe15g00813 813
15 18280866 18281660 - Bpe001740.1 Bpe15g00814 814
2 5055045 5055989 - CaPI482276_02g004340.1 Cam02g0434 434
2 5079461 5080621 + CaPI482276_02g004350.1 Cam02g0435 435
2 5085558 5087922 + CaPI482276_02g004360.1 Cam02g0436 436
2 5088904 5090898 - CaPI482276_02g004370.1 Cam02g0437 437
2 5100364 5101251 - CaPI482276_02g004390.1 Cam02g0439 439
2 5103639 5109929 + CaPI482276_02g004400.1 Cam02g0440 440
2 22840730 22842366 - CaPI482276_02g011640.1 Cam02g1164 1164
2 24635740 24638149 + CaPI482276_02g012440.1 Cam02g1244 1244
2 24705691 24706503 + CaPI482276_02g012490.1 Cam02g1249 1249
19 7146820 7150635 - Carg19354-RA Car19g00565 565
19 7152621 7156310 + Carg19353-RA Car19g00566 566
19 7160701 7163328 - Carg19351-RA Car19g00568 568
19 7165394 7166758 - Carg19350-RA Car19g00569 569
19 7180038 7181052 + Carg19349-RA Car19g00570 570
20 3665346 3666375 - Carg16170-RA Car20g00650 650
20 3674484 3677989 - Carg16173-RA Car20g00653 653
20 3680658 3685127 - Carg16174-RA Car20g00654 654
2 4060716 4061665 - CcPI632755_02g004500.1 Cco02g0450 450
2 4085192 4086366 + CcPI632755_02g004510.1 Cco02g0451 451
2 4091571 4093929 + CcPI632755_02g004520.1 Cco02g0452 452
2 4095136 4097094 - CcPI632755_02g004530.1 Cco02g0453 453
2 4106091 4106957 - CcPI632755_02g004550.1 Cco02g0455 455
2 22567459 22569098 - CcPI632755_02g012130.1 Cco02g1213 1213
2 24629420 24631835 + CcPI632755_02g012940.1 Cco02g1294 1294
2 24689616 24690437 + CcPI632755_02g012970.1 Cco02g1297 1297
2 4073603 4074545 - CePI673135_02g004320.1 Cec02g0432 432
2 4099592 4100791 + CePI673135_02g004330.1 Cec02g0433 433
2 4105395 4107548 + CePI673135_02g004340.1 Cec02g0434 434
2 4108949 4110870 - CePI673135_02g004350.1 Cec02g0435 435
2 4120427 4121285 - CePI673135_02g004370.1 Cec02g0437 437
2 4123513 4130035 + CePI673135_02g004380.1 Cec02g0438 438
2 27210141 27211784 - CePI673135_02g011640.1 Cec02g1164 1164
2 29115902 29118311 + CePI673135_02g012530.1 Cec02g1253 1253
2 29197349 29203815 + CePI673135_02g012590.1 Cec02g1259 1259
1 4917315 4918251 - Chy1G006790.1 Chy01g00679 679
1 4939841 4940991 + Chy1G006800.1 Chy01g00680 680
1 4944314 4946461 + Chy1G006810.1 Chy01g00681 681
1 4948386 4949336 - Chy1G006820.1 Chy01g00682 682
1 4957072 4969595 + Chy1G006840.1 Chy01g00684 684
11 2378919 2385988 - Chy11G188330.1 Chy11g00253 253
11 2389548 2392489 - Chy11G188340.1 Chy11g00254 254
11 2398066 2400494 - Chy11G188360.1 Chy11g00256 256
11 2405930 2410610 - Chy11G188370.1 Chy11g00257 257
2 3921089 3922041 - ClG42_02g0043500.10 Clacu02g0435 435
2 3948116 3949296 + ClG42_02g0043600.10 Clacu02g0436 436
2 3954248 3957577 + ClG42_02g0043700.10 Clacu02g0437 437
2 3957605 3959608 - ClG42_02g0043800.10 Clacu02g0438 438
2 3973347 3974230 - ClG42_02g0044000.10 Clacu02g0440 440
2 22943330 22944966 - ClG42_02g0115600.10 Clacu02g1156 1156
2 24797905 24800342 + ClG42_02g0122600.10 Clacu02g1226 1226
2 24872085 24872903 + ClG42_02g0123000.10 Clacu02g1230 1230
2 4162023 4163183 - ClCG02G004080.1 Cla02g00425 425
2 4189305 4190582 + ClCG02G004090.1 Cla02g00426 426
2 4195482 4197848 + ClCG02G004100.1 Cla02g00427 427
2 4199100 4201157 - ClCG02G004110.2 Cla02g00428 428
2 4214899 4216045 - ClCG02G004150.1 Cla02g00431 431
2 4220511 4228831 + ClCG02G004160.1 Cla02g00432 432
2 23085066 23086792 - ClCG02G011140.1 Cla02g01088 1088
2 25096127 25099440 + ClCG02G011900.1 Cla02g01166 1166
2 25114788 25118746 + ClCG02G011910.1 Cla02g01167 1167
2 25173802 25174714 + ClCG02G011940.1 Cla02g01170 1170
2 1171159 1175603 + CmaCh02G002580.1 Cma02g00258 258
2 1176817 1178775 + CmaCh02G002590.1 Cma02g00259 259
11 9102195 9103560 - CmaCh11G013790.1 Cma11g01379 1379
11 9111745 9112598 + CmaCh11G013800.1 Cma11g01380 1380
11 9114680 9117803 + CmaCh11G013810.1 Cma11g01381 1381
11 9117381 9119774 - CmaCh11G013820.1 Cma11g01382 1382
19 7378954 7382709 - CmaCh19G007360.1 Cma19g00736 736
19 7384133 7387584 + CmaCh19G007370.1 Cma19g00737 737
19 7389350 7391822 + CmaCh19G007380.1 Cma19g00738 738
19 7390991 7394515 - CmaCh19G007390.1 Cma19g00739 739
19 7396497 7398136 - CmaCh19G007400.1 Cma19g00740 740
19 7411330 7412509 + CmaCh19G007410.1 Cma19g00741 741
20 3513300 3516476 - CmaCh20G007490.1 Cma20g00749 749
20 3517913 3520799 - CmaCh20G007500.1 Cma20g00750 750
20 3523383 3526284 - CmaCh20G007520.1 Cma20g00752 752
20 3526391 3534028 - CmaCh20G007530.1 Cma20g00753 753
1 15966036 15967749 - MELO3C013352.2.1 Cme01g01259 1259
1 15988859 15990775 + MELO3C013353.2.1 Cme01g01260 1260
1 16003870 16006308 + MELO3C013356.2.1 Cme01g01262 1262
1 16006628 16009363 - MELO3C013357.2.1 Cme01g01263 1263
1 16016547 16018490 - MELO3C013359.2.1 Cme01g01265 1265
1 16021190 16026458 + MELO3C013360.2.1 Cme01g01266 1266
11 3814662 3815959 - MELO3C020819.2.1 Cme11g00378 378
11 3820752 3824070 - MELO3C020818.2.1 Cme11g00379 379
11 3826598 3830055 - MELO3C020817.2.1 Cme11g00380 380
11 3835039 3838411 - MELO3C020816.2.1 Cme11g00381 381
11 3842891 3854310 - MELO3C020815.2.1 Cme11g00382 382
1 5269710 5274591 + PI0019002.1 Cmetu01g0544 544
1 5249862 5251697 + PI0029076.1 Cmetu01g1192 1192
1 5255383 5257849 + PI0014470.1 Cmetu01g1199 1199
1 5225789 5226732 - PI0027727.1 Cmetu01g1717 1717
1 5266126 5267466 - PI0016777.1 Cmetu01g2289 2289
1 5258368 5260983 - PI0026765.1 Cmetu01g2682 2682
11 28626044 28627406 + PI0007954.1 Cmetu11g0473 473
11 28617978 28621732 + PI0024989.8 Cmetu11g0608 608
11 28602934 28606288 + PI0028275.1 Cmetu11g1470 1470
11 28593278 28598424 + PI0012181.1 Cmetu11g2130 2130
2 1220171 1223823 + CmoCh02G002540.1 Cmo02g00254 254
2 1225995 1232277 + CmoCh02G002550.1 Cmo02g00255 255
2 1232286 1235198 + CmoCh02G002560.1 Cmo02g00256 256
11 12278441 12279969 + CmoCh11G017360.1 Cmo11g01736 1736
11 12283825 12284637 + CmoCh11G017390.1 Cmo11g01739 1739
11 12286573 12288827 - CmoCh11G017400.1 Cmo11g01740 1740
11 12290474 12291404 - CmoCh11G017410.1 Cmo11g01741 1741
11 12299697 12300893 + CmoCh11G017420.1 Cmo11g01742 1742
19 7635242 7639131 - CmoCh19G007440.1 Cmo19g00744 744
19 7641007 7643712 + CmoCh19G007450.1 Cmo19g00745 745
19 7647003 7647800 + CmoCh19G007470.1 Cmo19g00747 747
19 7648484 7651750 - CmoCh19G007480.1 Cmo19g00748 748
19 7653330 7654917 - CmoCh19G007490.1 Cmo19g00749 749
19 7667721 7668975 + CmoCh19G007500.1 Cmo19g00750 750
20 3731642 3734171 - CmoCh20G007450.1 Cmo20g00745 745
20 3738608 3741365 - CmoCh20G007470.1 Cmo20g00747 747
20 3744228 3749039 - CmoCh20G007490.1 Cmo20g00749 749
2 3917130 3918083 - CmPI595203_02g004300.1 Cmu02g0430 430
2 3944062 3945243 + CmPI595203_02g004310.1 Cmu02g0431 431
2 3950183 3953513 + CmPI595203_02g004320.1 Cmu02g0432 432
2 3953541 3955544 - CmPI595203_02g004330.1 Cmu02g0433 433
2 3969280 3970157 - CmPI595203_02g004350.1 Cmu02g0435 435
2 22807249 22808885 - CmPI595203_02g011180.1 Cmu02g1118 1118
2 24665533 24667970 + CmPI595203_02g011930.1 Cmu02g1193 1193
2 24739608 24740426 + CmPI595203_02g011960.1 Cmu02g1196 1196
3 5190863 5194287 - Conep03aG0098800.1 Cone3ag0957 957
8 10565509 10567089 + Conep08aG0132100.1 Cone8ag1283 1283
8 10569318 10570178 - Conep08aG0132400.1 Cone8ag1286 1286
8 10573367 10574583 + Conep08aG0132500.1 Cone8ag1287 1287
12 9551826 9553528 + Conep12aG0127100.1 Cone12ag1231 1231
12 9553744 9555945 - Conep12aG0127200.1 Cone12ag1232 1232
12 9556241 9557250 - Conep12aG0127300.1 Cone12ag1233 1233
12 9562312 9563618 + Conep12aG0127400.1 Cone12ag1234 1234
4 6248479 6250563 + Cp4.1LG04g04970.1 Cpe04g00588 588
4 6254361 6255155 + Cp4.1LG04g05070.1 Cpe04g00591 591
4 6256950 6260192 - Cp4.1LG04g04940.1 Cpe04g00592 592
4 6261279 6262295 - Cp4.1LG04g04920.1 Cpe04g00593 593
4 6270651 6271999 + Cp4.1LG04g04840.1 Cpe04g00594 594
5 9639800 9643629 - Cp4.1LG05g13720.1 Cpe05g01371 1371
5 9644701 9648535 - Cp4.1LG05g13690.1 Cpe05g01372 1372
5 9651562 9655188 - Cp4.1LG05g13670.1 Cpe05g01373 1373
15 6676579 6680265 - Cp4.1LG15g05980.1 Cpe15g00589 589
15 6682597 6685273 + Cp4.1LG15g05910.1 Cpe15g00590 590
15 6688098 6691339 + Cp4.1LG15g05880.1 Cpe15g00593 593
15 6694582 6696303 - Cp4.1LG15g05950.1 Cpe15g00594 594
15 6709166 6710067 + Cp4.1LG15g05870.1 Cpe15g00595 595
16 5033078 5037984 + Cp4.1LG16g03210.1 Cpe16g00316 316
16 5039746 5043647 + Cp4.1LG16g03180.1 Cpe16g00317 317
16 5045606 5048982 + Cp4.1LG16g03230.1 Cpe16g00318 318
16 5051021 5052255 + Cp4.1LG16g03160.1 Cpe16g00319 319
2 4487890 4488834 - CrPI670011_02g007640.1 Cre02g0764 764
2 4514312 4515499 + CrPI670011_02g007650.1 Cre02g0765 765
2 4521615 4523574 + CrPI670011_02g007660.1 Cre02g0766 766
2 4524998 4526997 - CrPI670011_02g007670.1 Cre02g0767 767
2 4536539 4537392 - CrPI670011_02g007690.1 Cre02g0769 769
2 24792876 24794497 - CrPI670011_02g014210.1 Cre02g1421 1421
2 27231535 27239498 + CrPI670011_02g015050.1 Cre02g1505 1505
2 27352962 27353794 + CrPI670011_02g015130.1 Cre02g1513 1513
2 13318878 13324071 + CsaV3_2G016060.1 Csa02g01390 1390
2 13327695 13330862 + CsaV3_2G016070.1 Csa02g01391 1391
2 13335528 13338461 + CsaV3_2G016090.1 Csa02g01393 1393
2 13341061 13344993 + CsaV3_2G016100.1 Csa02g01394 1394
2 13348359 13350832 + CsaV3_2G016110.1 Csa02g01395 1395
7 889728 894761 - CsaV3_7G000950.1 Csa07g00095 95
7 896518 898026 + CsaV3_7G000960.1 Csa07g00096 96
7 903274 906284 + CsaV3_7G000980.1 Csa07g00098 98
7 906480 908968 - CsaV3_7G001000.1 Csa07g00100 100
7 911053 912684 - CsaV3_7G001010.1 Csa07g00101 101
7 936419 937546 + CsaV3_7G001040.1 Csa07g00104 104
2 4037041 4038207 - Hsped.02g04230.1 Hepe02g0423 423
2 4072871 4074241 + Hsped.02g04240.1 Hepe02g0424 424
2 4080562 4082948 + Hsped.02g04250.1 Hepe02g0425 425
2 4083582 4086743 - Hsped.02g04260.1 Hepe02g0426 426
2 4096773 4099429 - Hsped.02g04270.1 Hepe02g0427 427
8 2644498 2648967 + Hsped.08g02910.1 Hepe08g0291 291
8 2652502 2654721 + Hsped.08g02920.1 Hepe08g0292 292
8 2675260 2675977 + Hsped.08g02960.1 Hepe08g0296 296
10 7075319 7095868 + Lsi10G004930.1 Lsi10g00493 493
10 7102355 7105853 + Lsi10G004940.1 Lsi10g00494 494
10 7120987 7124254 + Lsi10G004960.1 Lsi10g00496 496
10 7134142 7135223 + Lsi10G004970.1 Lsi10g00497 497
10 10394485 10397591 - Lsi10G007580.1 Lsi10g00758 758
11 20474248 20477367 + Lsi11G011970.1 Lsi11g01197 1197
11 20487647 20488441 + Lsi11G011990.1 Lsi11g01199 1199
11 20491454 20493811 - Lsi11G012000.1 Lsi11g01200 1200
11 20499496 20501164 - Lsi11G012010.1 Lsi11g01201 1201
11 20528713 20530149 + Lsi11G012020.1 Lsi11g01202 1202
1 1497245 1498297 - Sed0025354.1 Sed01g0190 190
1 1506269 1509995 - Sed0000125.4 Sed01g0194 194
1 1510907 1514806 - Sed0011175.2 Sed01g0196 196
4 46902510 46904779 - Sed0006694.1 Sed04g3854 3854
5 34919126 34920098 - Sed0012285.1 Sed05g2214 2214
5 34945781 34947621 + Sed0023671.1 Sed05g2215 2215
5 34956719 34958792 - Sed0008134.1 Sed05g2217 2217
5 34962323 34969671 + Sed0003734.2 Sed05g2220 2220
5 43666024 43670527 + Sed0003263.1 Sed05g3488 3488
6 3386610 3388660 + Sed0012223.1 Sed06g0381 381
2 6356211 6357855 - Tan0016328.1 Tan02g0680 680
2 6389774 6391676 + Tan0006243.1 Tan02g0681 681
2 6403050 6405700 + Tan0016000.1 Tan02g0682 682
2 6407378 6410387 - Tan0017279.2 Tan02g0684 684
2 6421412 6425181 - Tan0011740.1 Tan02g0688 688
2 6441324 6445775 + Tan0007064.1 Tan02g0689 689
5 10135393 10136842 - Tan0016455.1 Tan05g1129 1129
5 10154301 10157679 - Tan0011604.4 Tan05g1133 1133
5 10171347 10174878 - Tan0012242.1 Tan05g1137 1137
5 10177137 10182596 - Tan0013859.1 Tan05g1140 1140
3 1640990 1645417 - Vvi3g156 Vvi3g156 156
3 1647089 1650863 + Vvi3g157 Vvi3g157 157
3 1655925 1660436 + Vvi3g158 Vvi3g158 158
3 1661189 1662457 + Vvi3g159 Vvi3g159 159
3 1670609 1674073 + Vvi3g160 Vvi3g160 160
3 1674325 1677060 - Vvi3g161 Vvi3g161 161
3 1679497 1683271 + Vvi3g162 Vvi3g162 162
3 1684207 1690440 - Vvi3g163 Vvi3g163 163
3 1691667 1692986 - Vvi3g164 Vvi3g164 164
3 1707519 1708550 + Vvi3g165 Vvi3g165 165
       

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