Doc-Alignment

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Cucurbitales genomes. We used V.vinifera as a reference, and by comparing homologous gene locus maps and Ks values between V.vinifera and other Cucurbitales, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We created a hierarchical lists of homologous genes using V.vinifera as a reference.
  The relevant gene ids can be obtained from the Cucurbitales blast and match under the Tools module. This link is Cucurbitales blast and match.

Orthogroup analysis platform
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Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g386 . . . Bda15g00649 Bpe12g00504 . . . . . . . . . Sed12g2048 . . Bhi02g00020 Tan09g1963 Cmetu02g0079 . . . . Cla06g01499 Cam06g1652 Cec06g1712 Cco06g1710 Clacu06g1618 Cmu06g1567 Cre06g2379 . . Cone13ag0009 Cone19ag0008 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa01g00349 . Cme02g01780
Vvi17g387 . Blo16g00148 . . . Bpe13g00334 Bma06g00008 . Cmo13g01090 . . . . . . Cpe20g00099 . . . . . . . . . . . . . . . Cone2ag0731 . . . Lsi02g00155 Csa01g00638 Chy12g01464 Cme12g01905 . . . Bda14g00904 . Bpe15g00554 . . Sed08g2156 . . Cma13g01049 . Car13g00882 Car18g00024 . . Bhi08g01040 Tan05g2304 Cmetu12g0484 Lac10g0203 Hepe07g2425 . . Cla04g01120 Cam04g1173 Cec01g1685 Cco01g1733 Clacu04g1201 Cmu04g1180 Cre01g1478 . . . .
Vvi17g388 . . . . . . . . . . Cma10g00261 . . . Sed08g0324 . . Bhi02g00021 Tan09g1964 Cmetu02g0027 . Hepe09g0314 . . Cla06g01500 Cam06g1653 Cec06g1713 Cco06g1711 Clacu06g1619 Cmu06g1568 Cre06g2380 . . Cone13ag0010 Cone19ag0009 . . . . . . . . . . Bma03g00878 . . Cmo10g00279 . . . . . . Cpe18g00735 . . . . . . . . . . . . . . Lsi06g01364 Csa01g00348 . Cme02g01781
Vvi17g389 . . . . . . . . Cmo13g01091 . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi02g00153 Csa01g00637 Chy12g01465 Cme12g01908 . . . Bda14g00903 . Bpe15g00555 . . Sed01g2262 . . Cma13g01050 . Car13g00883 . Cpe09g01146 . Bhi08g01041 Tan05g2307 Cmetu03g1392 Lac10g0201 Hepe07g2429 . . Cla04g01122 Cam04g1175 Cec01g1687 Cco01g1735 Clacu04g1203 Cmu04g1182 Cre01g1480 . . . .
Vvi17g390 . . . . . . . Bma12g00947 . . Cma10g00263 . Car10g00246 . . . . Bhi02g00024 Tan09g1967 . . . . . Cla06g01502 Cam06g1656 Cec06g1716 Cco06g1713 Clacu06g1622 Cmu06g1571 Cre06g2382 . . Cone13ag0011 . . . . . . Blo15g00355 . . Bpe07g00739 . . . . Cmo10g00280 . . . . . . Cpe18g00734 . . . . . . . . . . . . . . Lsi06g01366 Csa01g00343 Chy02g02399 Cme02g01783
Vvi17g391 . . Bda06g00498 . . . . Bma12g00948 . . Cma10g00264 . Car10g00247 . Sed08g0321 . . Bhi02g00029 Tan09g1973 Cmetu02g2048 . Hepe09g0310 . . Cla06g01503 Cam06g1657 Cec06g1719 Cco06g1714 Clacu06g1624 Cmu06g1573 Cre06g2383 . . Cone13ag0012 Cone19ag0010 . . . . . . . . . . . . . Cmo10g00281 . . . . . . Cpe18g00733 . . . . . . . . . . . . . . Lsi06g01367 Csa01g00307 Chy02g02431 Cme02g01784
Vvi17g392 . . . . . Bpe13g00333 Bma06g00023 . Cmo13g01092 . . Cma11g00242 . Car11g00222 Sed01g3903 . Cpe04g01429 Bhi02g00030 Tan09g1974 Cmetu02g1605 . Hepe09g0309 . . Cla06g01504 Cam06g1658 Cec06g1720 Cco06g1715 Clacu06g1625 Cmu06g1574 Cre06g2384 . . . . Lsi02g00151 Csa01g00636 Chy12g01466 Cme12g01909 . . . . . . . . Sed01g2263 . Cmo11g00247 Cma13g01051 . Car13g00884 . Cpe09g01147 . Bhi08g01042 Tan05g2309 Cmetu12g1411 Lac10g0200 Hepe07g2430 . . Cla04g01123 Cam04g1176 Cec01g1688 Cco01g1736 Clacu04g1204 Cmu04g1183 Cre01g1481 Lsi06g01368 Csa01g00308 Chy02g02430 Cme02g01785
Vvi17g393 . . . . . . . . . . . . . Car11g00221 Sed12g2041 . Cpe04g01430 Bhi02g00032 Tan09g1975 Cmetu02g0279 . Hepe09g0308 . . Cla06g01505 Cam06g1660 Cec06g1722 Cco06g1717 Clacu06g1626 Cmu06g1575 Cre06g2385 . . Cone13ag0013 Cone19ag0011 . . . . . . . Bda14g00902 . Bpe15g00556 Bma03g00876 . . . Cmo11g00246 . . . . . . . . . . . . . . . . . . . . Lsi06g01369 Csa01g00309 Chy02g02429 Cme02g01786
Vvi17g394 . Blo16g00149 . . . Bpe13g00331 Bma06g00010 . . . Cma10g00265 . Car10g00249 . Sed08g0320 . . Bhi02g00034 Tan09g1976 Cmetu02g1790 . . . . Cla06g01506 Cam06g1661 Cec06g1723 Cco06g1718 Clacu06g1627 Cmu06g1576 Cre06g2386 . . Cone13ag0014 Cone19ag0012 . . . . . . . . . . . . . Cmo10g00282 . . . . . . Cpe18g00732 . . . . . . . . . . . . . . Lsi06g01370 Csa01g00312 Chy02g02428 Cme02g01787
Vvi17g395 . . Bda06g00499 . . . . . . . Cma10g00266 Cma11g00241 Car10g00250 Car11g00220 Sed08g0319 . Cpe04g01431 Bhi02g00037 Tan09g1979 Cmetu02g1707 . Hepe09g0306 . . Cla06g01507 Cam06g1662 . Cco06g1719 Clacu06g1628 Cmu06g1577 Cre06g2387 . . Cone13ag0015 Cone19ag0013 . . . . . Blo15g00354 . . . . . . . Cmo10g00284 Cmo11g00244 . . . . . Cpe18g00731 . . . . . . . . . . . . . . Lsi06g01371 Csa01g00313 Chy02g02427 .
   
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Gene_GFF

Select Chromosome Start End Strand Old_gene Gene Num
6 7101554 7102660 + Bda023748.1 Bda06g00498 498
6 7104519 7106665 + Bda023749.1 Bda06g00499 499
14 7011543 7014553 - Bda027682.1 Bda14g00902 902
14 7026005 7028148 - Bda027683.1 Bda14g00903 903
14 7028827 7033669 - Bda027684.1 Bda14g00904 904
15 9945253 9954477 - Bda012496.1 Bda15g00649 649
2 390413 401352 + XM_039022944.1 Bhi02g00020 20
2 414365 415228 - XM_039024238.1 Bhi02g00021 21
2 524947 533962 + XM_039024834.1 Bhi02g00024 24
2 656091 658746 + XM_039022563.1 Bhi02g00029 29
2 664127 665387 - XM_039024630.1 Bhi02g00030 30
2 797082 800519 + XM_039023752.1 Bhi02g00032 32
2 800678 803909 - XM_039023756.1 Bhi02g00034 34
2 810241 813429 + XM_039024017.1 Bhi02g00037 37
8 33986281 33992464 + XM_039038181.1 Bhi08g01040 1040
8 34079486 34082200 + XM_039040146.1 Bhi08g01041 1041
8 34100288 34102201 - XM_039039709.1 Bhi08g01042 1042
15 4498639 4500855 - BLOR06748 Blo15g00354 354
15 4505174 4513709 - BLOR06749 Blo15g00355 355
16 3267483 3272184 + BLOR07396 Blo16g00148 148
16 3273236 3282394 + BLOR07397 Blo16g00149 149
3 8520027 8523050 - Bma017194.1 Bma03g00876 876
3 8557693 8558934 + Bma030996 Bma03g00878 878
6 229499 234336 + Bma022609.1 Bma06g00008 8
6 285496 286097 - Bma022613.1 Bma06g00010 10
6 512386 513568 + Bma022629.1 Bma06g00023 23
12 41390616 41399960 + Bma008290.1 Bma12g00947 947
12 41402507 41403516 + Bma008291.1 Bma12g00948 948
7 13925019 13939171 + Bpe021583.1 Bpe07g00739 739
12 10874562 10884045 + Bpe005767.1 Bpe12g00504 504
13 11180597 11183375 + Bpe006458.1 Bpe13g00331 331
13 11198011 11199202 + Bpe006460.2 Bpe13g00333 333
13 11201705 11206426 - Bpe006461.1 Bpe13g00334 334
15 16601516 16606374 + Bpe001489.1 Bpe15g00554 554
15 16607104 16609357 + Bpe001490.1 Bpe15g00555 555
15 16611293 16614304 + Bpe001491.1 Bpe15g00556 556
4 25789838 25794736 + CaPI482276_04g011730.1 Cam04g1173 1173
4 25833496 25836015 + CaPI482276_04g011750.1 Cam04g1175 1175
4 25836657 25837611 - CaPI482276_04g011760.1 Cam04g1176 1176
6 27939792 27950309 + CaPI482276_06g016520.1 Cam06g1652 1652
6 27952651 27953133 - CaPI482276_06g016530.1 Cam06g1653 1653
6 27989379 27997863 + CaPI482276_06g016560.1 Cam06g1656 1656
6 27999322 28001255 + CaPI482276_06g016570.1 Cam06g1657 1657
6 28004603 28005726 - CaPI482276_06g016580.1 Cam06g1658 1658
6 28011424 28014574 + CaPI482276_06g016600.1 Cam06g1660 1660
6 28015146 28017894 - CaPI482276_06g016610.1 Cam06g1661 1661
6 28020645 28023701 + CaPI482276_06g016620.1 Cam06g1662 1662
10 1174610 1183335 + Carg17897-RA Car10g00246 246
10 1183369 1186413 + Carg17896-RA Car10g00247 247
10 1188931 1190058 - Carg17894-RA Car10g00249 249
10 1190444 1193619 + Carg17893-RA Car10g00250 250
11 1250355 1253566 - Carg09169-RA Car11g00220 220
11 1254536 1257702 - Carg09168-RA Car11g00221 221
11 1258897 1260640 + Carg09167-RA Car11g00222 222
13 9281521 9286885 + Carg04790-RA Car13g00882 882
13 9287273 9288985 + Carg04789-RA Car13g00883 883
13 9289444 9294170 - Carg04787-RA Car13g00884 884
18 114729 121935 + Carg22762-RA Car18g00024 24
1 30045065 30049970 + CcPI632755_01g017330.1 Cco01g1733 1733
1 30054868 30057376 + CcPI632755_01g017350.1 Cco01g1735 1735
1 30058022 30058976 - CcPI632755_01g017360.1 Cco01g1736 1736
6 27636046 27646563 + CcPI632755_06g017100.1 Cco06g1710 1710
6 27649110 27649592 - CcPI632755_06g017110.1 Cco06g1711 1711
6 27671357 27690115 + CcPI632755_06g017130.1 Cco06g1713 1713
6 27691487 27693740 + CcPI632755_06g017140.1 Cco06g1714 1714
6 27697315 27698412 - CcPI632755_06g017150.1 Cco06g1715 1715
6 27703831 27706889 + CcPI632755_06g017170.1 Cco06g1717 1717
6 27707573 27710326 - CcPI632755_06g017180.1 Cco06g1718 1718
6 27712956 27717396 + CcPI632755_06g017190.1 Cco06g1719 1719
1 31468922 31473827 + CePI673135_01g016850.1 Cec01g1685 1685
1 31478752 31481260 + CePI673135_01g016870.1 Cec01g1687 1687
1 31481903 31482857 - CePI673135_01g016880.1 Cec01g1688 1688
6 30688542 30699108 + CePI673135_06g017120.1 Cec06g1712 1712
6 30701579 30702061 - CePI673135_06g017130.1 Cec06g1713 1713
6 30726248 30727453 + CePI673135_06g017160.1 Cec06g1716 1716
6 30747051 30749301 + CePI673135_06g017190.1 Cec06g1719 1719
6 30752893 30753990 - CePI673135_06g017200.1 Cec06g1720 1720
6 30759563 30762715 + CePI673135_06g017220.1 Cec06g1722 1722
6 30763399 30766113 - CePI673135_06g017230.1 Cec06g1723 1723
2 27747328 27754443 + Chy2G046660.1 Chy02g02399 2399
2 27953341 27955884 - Chy2G046940.1 Chy02g02427 2427
2 27956226 27968651 + Chy2G046950.1 Chy02g02428 2428
2 27969294 27972275 - Chy2G046960.1 Chy02g02429 2429
2 27974176 27975218 + Chy2G046970.1 Chy02g02430 2430
2 27976484 27979936 - Chy2G046980.1 Chy02g02431 2431
12 18585746 18586492 + Chy12G220640.1 Chy12g01464 1464
12 18606228 18608054 + Chy12G220650.1 Chy12g01465 1465
12 18608590 18609511 - Chy12G220660.1 Chy12g01466 1466
4 26177087 26181992 + ClG42_04g0120100.10 Clacu04g1201 1201
4 26186209 26188926 + ClG42_04g0120300.10 Clacu04g1203 1203
4 26189569 26190523 - ClG42_04g0120400.10 Clacu04g1204 1204
6 26990990 27002000 + ClG42_06g0161800.10 Clacu06g1618 1618
6 27004572 27005054 - ClG42_06g0161900.10 Clacu06g1619 1619
6 27034111 27037002 + ClG42_06g0162200.10 Clacu06g1622 1622
6 27051129 27053383 + ClG42_06g0162400.10 Clacu06g1624 1624
6 27056651 27057769 - ClG42_06g0162500.10 Clacu06g1625 1625
6 27063486 27066666 + ClG42_06g0162600.10 Clacu06g1626 1626
6 27067238 27069991 - ClG42_06g0162700.10 Clacu06g1627 1627
6 27072798 27075870 + ClG42_06g0162800.10 Clacu06g1628 1628
4 26405711 26410616 + ClCG04G011390.2 Cla04g01120 1120
4 26414833 26417716 + ClCG04G011410.1 Cla04g01122 1122
4 26418221 26419147 - ClCG04G011420.1 Cla04g01123 1123
6 28520449 28531287 + ClCG06G015150.2 Cla06g01499 1499
6 28533844 28535597 - ClCG06G015160.1 Cla06g01500 1500
6 28559684 28582163 + ClCG06G015180.1 Cla06g01502 1502
6 28583130 28585829 + ClCG06G015190.1 Cla06g01503 1503
6 28589068 28590188 - ClCG06G015200.1 Cla06g01504 1504
6 28595817 28599303 + ClCG06G015210.1 Cla06g01505 1505
6 28599293 28602492 - ClCG06G015220.2 Cla06g01506 1506
6 28605486 28608558 + ClCG06G015230.2 Cla06g01507 1507
10 1161545 1162027 - CmaCh10G002610.1 Cma10g00261 261
10 1166526 1175197 + CmaCh10G002630.1 Cma10g00263 263
10 1175431 1178650 + CmaCh10G002640.1 Cma10g00264 264
10 1179154 1182075 - CmaCh10G002650.1 Cma10g00265 265
10 1182659 1185665 + CmaCh10G002660.1 Cma10g00266 266
11 1225879 1231113 - CmaCh11G002410.1 Cma11g00241 241
11 1231938 1234614 + CmaCh11G002420.1 Cma11g00242 242
13 7987560 7993260 + CmaCh13G010490.1 Cma13g01049 1049
13 7993274 7996618 + CmaCh13G010500.1 Cma13g01050 1050
13 7995368 8000189 - CmaCh13G010510.1 Cma13g01051 1051
2 24645010 24655583 + MELO3C017274.2.1 Cme02g01780 1780
2 24657550 24658223 - MELO3C017273.2.1 Cme02g01781 1781
2 24675366 24683335 + MELO3C017271.2.1 Cme02g01783 1783
2 24683899 24686762 + MELO3C017270.2.1 Cme02g01784 1784
2 24688299 24689404 - MELO3C017269.2.1 Cme02g01785 1785
2 24691501 24694936 + MELO3C017268.2.1 Cme02g01786 1786
2 24695051 24698254 - MELO3C017267.2.1 Cme02g01787 1787
12 25161524 25162195 + MELO3C000868.2.1 Cme12g01905 1905
12 25178450 25182393 + MELO3C002063.2.1 Cme12g01908 1908
12 25180876 25182415 - MELO3C002062.2.1 Cme12g01909 1909
2 22990601 22991507 - PI0023136.1 Cmetu02g0027 27
2 22977714 22987480 + PI0019924.1 Cmetu02g0079 79
2 23035245 23039312 + PI0015083.1 Cmetu02g0279 279
2 23032158 23033252 - PI0002681.1 Cmetu02g1605 1605
2 23043322 23046343 + PI0026742.1 Cmetu02g1707 1707
2 23039089 23042729 - PI0004506.1 Cmetu02g1790 1790
2 23027477 23030197 + PI0011094.1 Cmetu02g2048 2048
3 501653 508022 + PI0005950.1 Cmetu03g1392 1392
12 1042788 1050602 - PI0019364.4 Cmetu12g0484 484
12 1018098 1019466 + PI0000044.1 Cmetu12g1411 1411
10 1243186 1243668 - CmoCh10G002790.1 Cmo10g00279 279
10 1248398 1257060 + CmoCh10G002800.1 Cmo10g00280 280
10 1257284 1260359 + CmoCh10G002810.1 Cmo10g00281 281
10 1260975 1263903 - CmoCh10G002820.1 Cmo10g00282 282
10 1265165 1268267 + CmoCh10G002840.1 Cmo10g00284 284
11 1219749 1221998 - CmoCh11G002440.1 Cmo11g00244 244
11 1222661 1225938 - CmoCh11G002460.1 Cmo11g00246 246
11 1227259 1229925 + CmoCh11G002470.1 Cmo11g00247 247
13 8998731 9004051 + CmoCh13G010900.1 Cmo13g01090 1090
13 9004084 9006672 + CmoCh13G010910.1 Cmo13g01091 1091
13 9006599 9007629 - CmoCh13G010920.1 Cmo13g01092 1092
4 26358855 26363760 + CmPI595203_04g011800.1 Cmu04g1180 1180
4 26367984 26370700 + CmPI595203_04g011820.1 Cmu04g1182 1182
4 26371343 26372297 - CmPI595203_04g011830.1 Cmu04g1183 1183
6 26893998 26904691 + CmPI595203_06g015670.1 Cmu06g1567 1567
6 26907244 26907726 - CmPI595203_06g015680.1 Cmu06g1568 1568
6 26942763 26945656 + CmPI595203_06g015710.1 Cmu06g1571 1571
6 26959766 26962020 + CmPI595203_06g015730.1 Cmu06g1573 1573
6 26965254 26966373 - CmPI595203_06g015740.1 Cmu06g1574 1574
6 26972083 26975263 + CmPI595203_06g015750.1 Cmu06g1575 1575
6 26975835 26978588 - CmPI595203_06g015760.1 Cmu06g1576 1576
6 26981404 26984475 + CmPI595203_06g015770.1 Cmu06g1577 1577
2 32974664 32980933 - Conep02aG0174400.1 Cone2ag0731 731
13 30296 50126 + Conep13aG0000900.1 Cone13ag0009 9
13 50374 51213 - Conep13aG0001000.1 Cone13ag0010 10
13 67764 72307 + Conep13aG0001300.1 Cone13ag0011 11
13 72414 74477 + Conep13aG0001400.1 Cone13ag0012 12
13 74899 78221 + Conep13aG0001500.1 Cone13ag0013 13
13 78234 80368 - Conep13aG0001600.1 Cone13ag0014 14
13 84506 86896 + Conep13aG0001700.1 Cone13ag0015 15
19 62907 83024 + Conep19aG0000800.1 Cone19ag0008 8
19 83339 83818 - Conep19aG0000900.1 Cone19ag0009 9
19 106347 109188 + Conep19aG0001200.1 Cone19ag0010 10
19 109893 112257 + Conep19aG0001300.1 Cone19ag0011 11
19 113284 115102 - Conep19aG0001400.1 Cone19ag0012 12
19 115372 117376 + Conep19aG0001500.1 Cone19ag0013 13
4 11451491 11453255 - Cp4.1LG04g14320.1 Cpe04g01429 1429
4 11454808 11458144 + Cp4.1LG04g14160.1 Cpe04g01430 1430
4 11458832 11462196 + Cp4.1LG04g14180.1 Cpe04g01431 1431
9 9779525 9793166 - Cp4.1LG09g11590.1 Cpe09g01146 1146
9 9784099 9785048 + Cp4.1LG09g11440.1 Cpe09g01147 1147
18 7142784 7145972 - Cp4.1LG18g07370.1 Cpe18g00731 731
18 7146286 7149131 + Cp4.1LG18g07290.1 Cpe18g00732 732
18 7150207 7153030 - Cp4.1LG18g07400.1 Cpe18g00733 733
18 7153327 7161901 - Cp4.1LG18g07380.1 Cpe18g00734 734
18 7167536 7168018 + Cp4.1LG18g07230.1 Cpe18g00735 735
20 522155 529921 - Cp4.1LG20g01050.1 Cpe20g00099 99
1 28008103 28013001 + CrPI670011_01g014780.1 Cre01g1478 1478
1 28017915 28020415 + CrPI670011_01g014800.1 Cre01g1480 1480
1 28021057 28022011 - CrPI670011_01g014810.1 Cre01g1481 1481
6 31703631 31714732 + CrPI670011_06g023790.1 Cre06g2379 2379
6 31717299 31717781 - CrPI670011_06g023800.1 Cre06g2380 2380
6 31739775 31747697 + CrPI670011_06g023820.1 Cre06g2382 2382
6 31751909 31763999 + CrPI670011_06g023830.1 Cre06g2383 2383
6 31767600 31768691 - CrPI670011_06g023840.1 Cre06g2384 2384
6 31774095 31777270 + CrPI670011_06g023850.1 Cre06g2385 2385
6 31777954 31780707 - CrPI670011_06g023860.1 Cre06g2386 2386
6 31783544 31786548 + CrPI670011_06g023870.1 Cre06g2387 2387
1 1925275 1928140 + CsaV3_1G003070.1 Csa01g00307 307
1 1929702 1930980 - CsaV3_1G003080.1 Csa01g00308 308
1 1932281 1935918 + CsaV3_1G003090.1 Csa01g00309 309
1 1942969 1946162 - CsaV3_1G003120.1 Csa01g00312 312
1 1946759 1949792 + CsaV3_1G003130.1 Csa01g00313 313
1 2142237 2149710 - CsaV3_1G003430.1 Csa01g00343 343
1 2169980 2171696 + CsaV3_1G003480.1 Csa01g00348 348
1 2172649 2184142 - CsaV3_1G003490.1 Csa01g00349 349
1 4048451 4051242 + CsaV3_1G006360.1 Csa01g00636 636
1 4048458 4052312 - CsaV3_1G006370.1 Csa01g00637 637
1 4052892 4058649 - CsaV3_1G006380.1 Csa01g00638 638
7 68624261 68630376 + Hsped.07g24250.1 Hepe07g2425 2425
7 68648989 68652478 + Hsped.07g24290.1 Hepe07g2429 2429
7 68651673 68655383 - Hsped.07g24300.1 Hepe07g2430 2430
9 2660503 2663612 - Hsped.09g03060.1 Hepe09g0306 306
9 2668921 2672085 - Hsped.09g03080.1 Hepe09g0308 308
9 2678901 2680002 + Hsped.09g03090.1 Hepe09g0309 309
9 2681508 2684631 - Hsped.09g03100.1 Hepe09g0310 310
9 2724450 2725302 + Hsped.09g03140.1 Hepe09g0314 314
10 1549994 1550709 + Lag0024245.1 Lac10g0200 200
10 1551527 1556005 - Lag0024246.1 Lac10g0201 201
10 1565867 1570781 - Lag0024248.1 Lac10g0203 203
2 1266025 1266564 + Lsi02G001510.1 Lsi02g00151 151
2 1267419 1270047 - Lsi02G001530.1 Lsi02g00153 153
2 1273764 1280256 - Lsi02G001550.1 Lsi02g00155 155
6 24210773 24211255 - Lsi06G013640.1 Lsi06g01364 1364
6 24233652 24254162 + Lsi06G013660.1 Lsi06g01366 1366
6 24255105 24257857 + Lsi06G013670.1 Lsi06g01367 1367
6 24261482 24262561 - Lsi06G013680.1 Lsi06g01368 1368
6 24266524 24270211 + Lsi06G013690.1 Lsi06g01369 1369
6 24270261 24273433 - Lsi06G013700.1 Lsi06g01370 1370
6 24275866 24279262 + Lsi06G013710.1 Lsi06g01371 1371
1 17135832 17141432 + Sed0014753.1 Sed01g2262 2262
1 17141546 17143732 - Sed0011314.1 Sed01g2263 2263
1 68255993 68260396 - Sed0021933.1 Sed01g3903 3903
8 1913281 1916711 - Sed0015508.1 Sed08g0319 319
8 1917866 1921451 + Sed0016272.1 Sed08g0320 320
8 1923011 1927022 - Sed0008961.1 Sed08g0321 321
8 1942768 1943884 + Sed0008547.1 Sed08g0324 324
8 35485619 35491469 - Sed0021378.1 Sed08g2156 2156
12 31258027 31262292 - Sed0009727.1 Sed12g2041 2041
12 31313577 31324874 - Sed0011411.1 Sed12g2048 2048
5 74511755 74518170 + Tan0017694.2 Tan05g2304 2304
5 74529162 74537823 + Tan0019578.1 Tan05g2307 2307
5 74552921 74554959 - Tan0020832.1 Tan05g2309 2309
9 70501067 70512682 + Tan0006304.2 Tan09g1963 1963
9 70515324 70515806 - Tan0012743.1 Tan09g1964 1964
9 70544751 70548562 + Tan0014480.1 Tan09g1967 1967
9 70574144 70576565 + Tan0002975.3 Tan09g1973 1973
9 70578870 70579975 - Tan0017036.1 Tan09g1974 1974
9 70581830 70584701 + Tan0006045.1 Tan09g1975 1975
9 70585505 70589077 - Tan0006001.1 Tan09g1976 1976
9 70590161 70593150 + Tan0010184.3 Tan09g1979 1979
17 4682120 4698574 + Vvi17g386 Vvi17g386 386
17 4702497 4708871 + Vvi17g387 Vvi17g387 387
17 4709594 4710077 - Vvi17g388 Vvi17g388 388
17 4726334 4732295 + Vvi17g389 Vvi17g389 389
17 4744621 4762782 + Vvi17g390 Vvi17g390 390
17 4763217 4769124 + Vvi17g391 Vvi17g391 391
17 4771398 4773002 - Vvi17g392 Vvi17g392 392
17 4778583 4784169 + Vvi17g393 Vvi17g393 393
17 4784644 4791492 - Vvi17g394 Vvi17g394 394
17 4792627 4798676 + Vvi17g395 Vvi17g395 395
       

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