Doc-Alignment

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Cucurbitales genomes. We used V.vinifera as a reference, and by comparing homologous gene locus maps and Ks values between V.vinifera and other Cucurbitales, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We created a hierarchical lists of homologous genes using V.vinifera as a reference.
  The relevant gene ids can be obtained from the Cucurbitales blast and match under the Tools module. This link is Cucurbitales blast and match.

Orthogroup analysis platform
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Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g399 . . . . . . . . . . . Cma14g01662 . Car14g01495 Sed02g1286 . Cpe03g01403 Bhi01g00887 Tan10g0913 Cmetu06g0354 . Hepe05g1503 . Lcy11g1478 . . . . . . . . Cone15ag0804 . . Lsi05g01475 . . Cme06g00666 . Blo07g00198 Bda11g00551 . . Bpe13g00634 . Bma06g01530 . . Cmo14g01706 . . . . . . . . . . . . . Cla05g00595 Cam05g0655 Cec05g0663 Cco05g0659 Clacu05g0648 Cmu05g0617 Cre05g0685 . Csa03g01391 Chy06g00634 .
Vvi5g400 . . . . . . . . . . . Cma14g01664 . Car14g01497 Sed02g1285 . Cpe03g01404 Bhi01g00884 Tan10g0912 Cmetu10g1725 . Hepe05g1504 . Lcy11g1479 . . . . . . . . . Cone7ag0196 Cone4ag0189 Lsi05g01473 . . Cme06g00665 Blo02g00561 . . . . . . . . . Cmo14g01708 . . . . . . . . . . . . . Cla05g00594 Cam05g0654 Cec05g0662 Cco05g0658 Clacu05g0647 Cmu05g0616 Cre05g0684 . Csa03g01390 Chy06g00633 .
Vvi5g401 . . . . . . . . Cmo08g01158 Cmo17g00274 . Cma14g01665 . Car14g01498 . . Cpe03g01405 Bhi01g00882 . . Lac12g2352 Hepe05g1505 . Lcy11g1482 Cla06g00528 Cam06g0567 Cec06g0567 Cco06g0574 Clacu06g0555 Cmu06g0550 Cre06g1319 Cone14ag0804 Cone15ag0805 . Cone4ag0190 Lsi05g01472 . Chy11g01447 Cme06g00664 Blo02g00562 . . . . . . . . . Cmo14g01709 Cma08g01186 Cma17g00286 Car08g01063 Car17g00262 Cpe12g00239 Cpe17g00110 Bhi12g01776 . . . Hepe03g0147 . Lcy13g0226 Cla05g00593 Cam05g0653 Cec05g0661 Cco05g0657 Clacu05g0646 Cmu05g0615 Cre05g0683 Lsi09g01376 Csa03g01389 Chy06g00632 Cme11g01952
Vvi5g402 . . . . . . . Bma05g00953 Cmo08g01156 Cmo17g00273 . Cma14g01666 . Car14g01499 Sed02g1284 . Cpe03g01406 Bhi01g00881 Tan10g0911 Cmetu06g2183 Lac12g2350 . . . Cla06g00529 Cam06g0568 Cec06g0568 Cco06g0575 Clacu06g0556 Cmu06g0551 Cre06g1320 . . . . Lsi05g01471 . Chy11g01446 Cme06g00663 Blo02g00563 . . . . . . . . . Cmo14g01710 Cma08g01185 Cma17g00285 Car08g01062 Car17g00261 Cpe12g00238 Cpe17g00111 Bhi12g01777 . . . . . . Cla05g00592 Cam05g0652 Cec05g0660 Cco05g0656 Clacu05g0645 Cmu05g0614 Cre05g0682 Lsi09g01374 Csa03g01388 Chy06g00631 Cme11g01951
Vvi5g403 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi5g404 . . Bda03g01246 . . . . . Cmo08g01155 Cmo17g00272 . . . . . . . . . . . . . . Cla06g00530 Cam06g0571 . Cco06g0577 Clacu06g0559 Cmu06g0553 Cre06g1321 . . Cone7ag0198 Cone4ag0192 . . Chy11g01445 . . . . . . . . . . . . Cma08g01184 Cma17g00284 Car08g01061 Car17g00260 . Cpe17g00112 Bhi12g01779 . . . . . . . . . . . . . Lsi09g01373 . . Cme11g01950
Vvi5g405 . . Bda03g01248 . . Bpe14g01357 . . Cmo08g01154 Cmo17g00271 . . . . . . . . . . . . . . Cla06g00531 Cam06g0572 Cec06g0570 Cco06g0578 Clacu06g0560 Cmu06g0554 Cre06g1322 . Cone15ag0808 . . . . Chy11g01444 . . . . . . . . . Sed06g0516 . . Cma08g01183 . Car08g01059 Car17g00259 Cpe12g00236 Cpe17g00113 Bhi12g01780 Tan06g2588 Cmetu07g1857 Lac12g2348 . . . . . . . . . . . . . Cme11g01949
Vvi5g406 . . . Bda08g00367 . . . . Cmo08g01153 Cmo17g00269 . . . . . . . . . . . . . . Cla06g00532 Cam06g0574 Cec06g0571 Cco06g0579 Clacu06g0561 Cmu06g0555 Cre06g1323 Cone14ag0806 Cone15ag0809 . . . . Chy11g01443 . . . . . . . . . Sed07g0944 . . Cma08g01182 Cma17g00282 Car08g01058 Car17g00257 Cpe12g00235 Cpe17g00114 Bhi12g01781 Tan06g2090 . . . . . . . . . . . . Lsi09g01372 . . Cme11g01948
Vvi5g407 . . . . . . . . . . Cma06g01446 Cma14g01667 Car06g01248 Car14g01501 Sed02g1283 Cpe08g00229 Cpe03g01407 Bhi01g00879 Tan10g0910 Cmetu01g2218 . Hepe05g1507 . . . . . . . . . . . Cone7ag0200 Cone4ag0193 Lsi05g01470 . . Cme06g00662 . . Bda11g00552 . . Bpe13g00632 . Bma06g01531 . Cmo06g01448 Cmo14g01712 . . . . . . . . . . . . . Cla05g00591 Cam05g0650 Cec05g0658 Cco05g0654 Clacu05g0643 Cmu05g0612 Cre05g0680 . Csa03g01387 Chy06g00630 .
Vvi5g408 . . Bda03g00908 . Bpe04g00852 Bpe14g01165 Bma04g00803 . Cmo08g01152 Cmo17g00268 . . . . . . . . . . . . . . Cla06g00533 Cam06g0575 Cec06g0572 Cco06g0580 Clacu06g0562 Cmu06g0556 Cre06g1324 . . Cone7ag0201 Cone4ag0194 . . Chy11g01442 . . Blo07g00199 . . . . . . . . . Cma08g01181 Cma17g00281 Car08g01057 Car17g00256 Cpe12g00234 Cpe17g00115 Bhi12g01782 . . . . . . . . . . . . . Lsi09g01371 . . Cme11g01947
   
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Gene_GFF

Select Chromosome Start End Strand Old_gene Gene Num
3 7926248 7929003 + Bda016904.1 Bda03g00908 908
3 17798169 17802038 - Bda017369.1 Bda03g01246 1246
3 17846906 17853769 - Bda017371.1 Bda03g01248 1248
8 3754904 3761044 - Bda024808.1 Bda08g00367 367
11 5741329 5750744 - Bda005287.1 Bda11g00551 551
11 5758256 5759401 - Bda005289.1 Bda11g00552 552
1 16500079 16501610 - XM_039022234.1 Bhi01g00879 879
1 16565801 16566863 + XM_039046781.1 Bhi01g00881 881
1 16650131 16654014 + XM_039022020.1 Bhi01g00882 882
1 16735618 16750808 - XM_039035570.1 Bhi01g00884 884
1 16831379 16833636 + XM_039022615.1 Bhi01g00887 887
12 57117932 57121110 - XM_039018673.1 Bhi12g01776 1776
12 57127179 57128765 - XM_039019654.1 Bhi12g01777 1777
12 57157729 57163806 - XM_039019871.1 Bhi12g01779 1779
12 57182398 57188572 - XM_039018728.1 Bhi12g01780 1780
12 57200482 57205208 + XM_039020165.1 Bhi12g01781 1781
12 57206224 57208419 - XM_039020041.1 Bhi12g01782 1782
2 10170829 10177041 + BLOR10291 Blo02g00561 561
2 10177700 10179860 - BLOR10292 Blo02g00562 562
2 10228097 10229119 - BLOR10293 Blo02g00563 563
7 2445082 2460380 - BLOR18130 Blo07g00198 198
7 2465562 2467886 + BLOR18131 Blo07g00199 199
4 9259809 9262545 - Bma019333.1 Bma04g00803 803
5 47729679 47730698 + Bma022097.1 Bma05g00953 953
6 51671384 51672806 - Bma024643.1 Bma06g01530 1530
6 51680303 51681376 - Bma024645.2 Bma06g01531 1531
4 5621706 5624414 - Bpe015514.1 Bpe04g00852 852
13 13243402 13244550 + Bpe010331.1 Bpe13g00632 632
13 13251466 13252947 + Bpe010334.1 Bpe13g00634 634
14 8666663 8671334 + Bpe014538.1 Bpe14g01165 1165
14 10862929 10864898 - Bpe014714.1 Bpe14g01357 1357
5 5632056 5633300 - CaPI482276_05g006500.1 Cam05g0650 650
5 5642038 5643186 + CaPI482276_05g006520.1 Cam05g0652 652
5 5650384 5653912 + CaPI482276_05g006530.1 Cam05g0653 653
5 5657305 5667598 - CaPI482276_05g006540.1 Cam05g0654 654
5 5669394 5676691 + CaPI482276_05g006550.1 Cam05g0655 655
6 7742050 7744645 - CaPI482276_06g005670.1 Cam06g0567 567
6 7750885 7751931 - CaPI482276_06g005680.1 Cam06g0568 568
6 7771502 7776595 - CaPI482276_06g005710.1 Cam06g0571 571
6 7779802 7785161 - CaPI482276_06g005720.1 Cam06g0572 572
6 7787287 7791065 + CaPI482276_06g005740.1 Cam06g0574 574
6 7793351 7795334 - CaPI482276_06g005750.1 Cam06g0575 575
6 8993724 8995007 - Carg17387-RA Car06g01248 1248
8 7231408 7232676 + Carg15936-RA Car08g01057 1057
8 7233714 7237924 - Carg15937-RA Car08g01058 1058
8 7238506 7240960 + Carg15938-RA Car08g01059 1059
8 7244750 7250332 + Carg15940-RA Car08g01061 1061
8 7261257 7262342 + Carg15941-RA Car08g01062 1062
8 7266066 7269236 + Carg15942-RA Car08g01063 1063
14 12393874 12395605 - Carg20159-RA Car14g01495 1495
14 12397314 12408745 + Carg20161-RA Car14g01497 1497
14 12409636 12412526 - Carg20162-RA Car14g01498 1498
14 12415492 12416514 - Carg20163-RA Car14g01499 1499
14 12421886 12423831 + Carg23833-RA Car14g01501 1501
17 1590616 1594089 + Carg05462-RA Car17g00256 256
17 1595081 1598724 - Carg05463-RA Car17g00257 257
17 1599925 1604996 + Carg05465-RA Car17g00259 259
17 1608559 1611717 + Carg05466-RA Car17g00260 260
17 1620841 1621896 + Carg05467-RA Car17g00261 261
17 1625720 1627045 + Carg05468-RA Car17g00262 262
5 5328467 5329711 - CcPI632755_05g006540.1 Cco05g0654 654
5 5338467 5339552 + CcPI632755_05g006560.1 Cco05g0656 656
5 5346639 5349672 + CcPI632755_05g006570.1 Cco05g0657 657
5 5352956 5363280 - CcPI632755_05g006580.1 Cco05g0658 658
5 5365065 5366827 + CcPI632755_05g006590.1 Cco05g0659 659
6 6181990 6184460 - CcPI632755_06g005740.1 Cco06g0574 574
6 6190756 6191802 - CcPI632755_06g005750.1 Cco06g0575 575
6 6211492 6216584 - CcPI632755_06g005770.1 Cco06g0577 577
6 6219572 6224871 - CcPI632755_06g005780.1 Cco06g0578 578
6 6227015 6230758 + CcPI632755_06g005790.1 Cco06g0579 579
6 6233236 6235149 - CcPI632755_06g005800.1 Cco06g0580 580
5 5339220 5340464 - CePI673135_05g006580.1 Cec05g0658 658
5 5349195 5350343 + CePI673135_05g006600.1 Cec05g0660 660
5 5357613 5360983 + CePI673135_05g006610.1 Cec05g0661 661
5 5364398 5374709 - CePI673135_05g006620.1 Cec05g0662 662
5 5376550 5378351 + CePI673135_05g006630.1 Cec05g0663 663
6 6278687 6281162 - CePI673135_06g005670.1 Cec06g0567 567
6 6287423 6288469 - CePI673135_06g005680.1 Cec06g0568 568
6 6307729 6324213 - CePI673135_06g005700.1 Cec06g0570 570
6 6326332 6330141 + CePI673135_06g005710.1 Cec06g0571 571
6 6332462 6334441 - CePI673135_06g005720.1 Cec06g0572 572
6 4274848 4276044 - Chy6G111580.1 Chy06g00630 630
6 4282529 4283551 + Chy6G111590.1 Chy06g00631 631
6 4288360 4291156 + Chy6G111600.1 Chy06g00632 632
6 4293621 4303818 - Chy6G111610.1 Chy06g00633 633
6 4303933 4306513 + Chy6G111620.1 Chy06g00634 634
11 21228687 21230687 + Chy11G200220.1 Chy11g01442 1442
11 21231892 21235689 - Chy11G200230.1 Chy11g01443 1443
11 21238693 21243672 + Chy11G200240.1 Chy11g01444 1444
11 21245808 21250662 + Chy11G200250.1 Chy11g01445 1445
11 21268595 21269641 + Chy11G200260.1 Chy11g01446 1446
11 21275697 21277865 + Chy11G200270.1 Chy11g01447 1447
5 5357140 5358384 - ClG42_05g0064300.10 Clacu05g0643 643
5 5367307 5368329 + ClG42_05g0064500.10 Clacu05g0645 645
5 5375511 5378995 + ClG42_05g0064600.10 Clacu05g0646 646
5 5382354 5392673 - ClG42_05g0064700.10 Clacu05g0647 647
5 5394454 5396253 + ClG42_05g0064800.10 Clacu05g0648 648
6 6292837 6295093 - ClG42_06g0055500.10 Clacu06g0555 555
6 6301225 6302271 - ClG42_06g0055600.10 Clacu06g0556 556
6 6321712 6326836 - ClG42_06g0055900.10 Clacu06g0559 559
6 6329945 6335230 - ClG42_06g0056000.10 Clacu06g0560 560
6 6337342 6341155 + ClG42_06g0056100.10 Clacu06g0561 561
6 6343474 6345445 - ClG42_06g0056200.10 Clacu06g0562 562
5 5418786 5420030 - ClCG05G005543.1 Cla05g00591 591
5 5428686 5430408 + ClCG05G005547.1 Cla05g00592 592
5 5436842 5440963 + ClCG05G005550.2 Cla05g00593 593
5 5443838 5454467 - ClCG05G005560.2 Cla05g00594 594
5 5455934 5458047 + ClCG05G005570.1 Cla05g00595 595
6 6360444 6363911 - ClCG06G005630.1 Cla06g00528 528
6 6369790 6370836 - ClCG06G005640.1 Cla06g00529 529
6 6389871 6395483 - ClCG06G005650.1 Cla06g00530 530
6 6398541 6403825 - ClCG06G005660.2 Cla06g00531 531
6 6405669 6409983 + ClCG06G005670.1 Cla06g00532 532
6 6411699 6414265 - ClCG06G005680.2 Cla06g00533 533
6 9266037 9267323 - CmaCh06G014460.1 Cma06g01446 1446
8 7269728 7272402 + CmaCh08G011810.1 Cma08g01181 1181
8 7272832 7276951 - CmaCh08G011820.1 Cma08g01182 1182
8 7277504 7283165 + CmaCh08G011830.1 Cma08g01183 1183
8 7283551 7289202 + CmaCh08G011840.1 Cma08g01184 1184
8 7299602 7300687 + CmaCh08G011850.1 Cma08g01185 1185
8 7303681 7306760 + CmaCh08G011860.1 Cma08g01186 1186
14 12434520 12438936 - CmaCh14G016620.1 Cma14g01662 1662
14 12442033 12453038 + CmaCh14G016640.1 Cma14g01664 1664
14 12453529 12456698 - CmaCh14G016650.1 Cma14g01665 1665
14 12459048 12460070 - CmaCh14G016660.1 Cma14g01666 1666
14 12464497 12469406 + CmaCh14G016670.1 Cma14g01667 1667
17 1488039 1491345 + CmaCh17G002810.1 Cma17g00281 281
17 1492112 1495934 - CmaCh17G002820.1 Cma17g00282 282
17 1497171 1510500 + CmaCh17G002840.1 Cma17g00284 284
17 1518930 1519988 + CmaCh17G002850.1 Cma17g00285 285
17 1524974 1527140 + CmaCh17G002860.1 Cma17g00286 286
6 4264856 4266537 - MELO3C006579.2.1 Cme06g00662 662
6 4273418 4274440 + MELO3C006580.2.1 Cme06g00663 663
6 4280650 4283464 + MELO3C006581.2.1 Cme06g00664 664
6 4285341 4295446 - MELO3C006582.2.1 Cme06g00665 665
6 4296522 4300025 + MELO3C006583.2.1 Cme06g00666 666
11 27529767 27532129 + MELO3C021390.2.1 Cme11g01947 1947
11 27532929 27537296 - MELO3C021389.2.1 Cme11g01948 1948
11 27546075 27551058 + MELO3C021388.2.1 Cme11g01949 1949
11 27554132 27559562 + MELO3C021387.2.1 Cme11g01950 1950
11 27574845 27576143 + MELO3C021386.2.1 Cme11g01951 1951
11 27581502 27584933 + MELO3C021385.2.1 Cme11g01952 1952
1 24222025 24223424 - PI0012622.1 Cmetu01g2218 2218
6 4531326 4533262 + PI0007889.1 Cmetu06g0354 354
6 4509033 4510193 + PI0018496.1 Cmetu06g2183 2183
7 3185065 3188123 - PI0020760.1 Cmetu07g1857 1857
10 17134593 17139840 - PI0013075.1 Cmetu10g1725 1725
6 10468475 10469758 - CmoCh06G014480.1 Cmo06g01448 1448
8 7366164 7368999 + CmoCh08G011520.1 Cmo08g01152 1152
8 7369628 7373797 - CmoCh08G011530.1 Cmo08g01153 1153
8 7374345 7379418 + CmoCh08G011540.1 Cmo08g01154 1154
8 7379780 7385407 + CmoCh08G011550.1 Cmo08g01155 1155
8 7395747 7396832 + CmoCh08G011560.1 Cmo08g01156 1156
8 7400661 7402659 + CmoCh08G011580.1 Cmo08g01158 1158
14 13391704 13394368 - CmoCh14G017060.1 Cmo14g01706 1706
14 13396945 13408138 + CmoCh14G017080.1 Cmo14g01708 1708
14 13411004 13412592 - CmoCh14G017090.1 Cmo14g01709 1709
14 13415418 13416440 - CmoCh14G017100.1 Cmo14g01710 1710
14 13420537 13421685 + CmoCh14G017120.1 Cmo14g01712 1712
17 1610693 1614489 + CmoCh17G002680.1 Cmo17g00268 268
17 1615519 1619221 - CmoCh17G002690.1 Cmo17g00269 269
17 1620433 1625293 + CmoCh17G002710.1 Cmo17g00271 271
17 1626656 1632298 + CmoCh17G002720.1 Cmo17g00272 272
17 1643212 1644264 + CmoCh17G002730.1 Cmo17g00273 273
17 1648265 1650207 + CmoCh17G002740.1 Cmo17g00274 274
5 5200673 5201917 - CmPI595203_05g006120.1 Cmu05g0612 612
5 5210837 5211859 + CmPI595203_05g006140.1 Cmu05g0614 614
5 5219014 5222498 + CmPI595203_05g006150.1 Cmu05g0615 615
5 5225858 5236177 - CmPI595203_05g006160.1 Cmu05g0616 616
5 5237969 5239768 + CmPI595203_05g006170.1 Cmu05g0617 617
6 6100029 6102285 - CmPI595203_06g005500.1 Cmu06g0550 550
6 6108412 6109458 - CmPI595203_06g005510.1 Cmu06g0551 551
6 6128950 6134072 - CmPI595203_06g005530.1 Cmu06g0553 553
6 6137178 6142503 - CmPI595203_06g005540.1 Cmu06g0554 554
6 6144613 6148426 + CmPI595203_06g005550.1 Cmu06g0555 555
6 6150745 6152718 - CmPI595203_06g005560.1 Cmu06g0556 556
4 885225 892101 + Conep04aG0019800.1 Cone4ag0189 189
4 891397 893858 - Conep04aG0019900.1 Cone4ag0190 190
4 902775 906869 - Conep04aG0020100.1 Cone4ag0192 192
4 907233 908730 + Conep04aG0020200.1 Cone4ag0193 193
4 909301 911239 - Conep04aG0020300.1 Cone4ag0194 194
7 832175 838771 + Conep07aG0020100.1 Cone7ag0196 196
7 848276 850797 - Conep07aG0020300.1 Cone7ag0198 198
7 852374 853636 + Conep07aG0020500.1 Cone7ag0200 200
7 854414 856145 - Conep07aG0020600.1 Cone7ag0201 201
14 4760126 4763492 - Conep14aG0082100.1 Cone14ag0804 804
14 4785103 4794381 + Conep14aG0082300.1 Cone14ag0806 806
15 4933808 4935156 - Conep15aG0081900.1 Cone15ag0804 804
15 4938604 4941732 - Conep15aG0082000.1 Cone15ag0805 805
15 5006981 5011422 - Conep15aG0082300.1 Cone15ag0808 808
15 5021693 5025984 + Conep15aG0082400.1 Cone15ag0809 809
3 11313226 11315532 - Cp4.1LG03g10970.1 Cpe03g01403 1403
3 11317314 11329161 + Cp4.1LG03g11070.1 Cpe03g01404 1404
3 11329796 11333196 - Cp4.1LG03g10990.1 Cpe03g01405 1405
3 11335497 11336519 - Cp4.1LG03g10960.1 Cpe03g01406 1406
3 11340871 11342061 + Cp4.1LG03g11100.1 Cpe03g01407 1407
8 1520441 1521724 + Cp4.1LG08g04450.1 Cpe08g00229 229
12 1569652 1572937 + Cp4.1LG12g02260.1 Cpe12g00234 234
12 1573844 1578151 - Cp4.1LG12g02350.1 Cpe12g00235 235
12 1578988 1584250 + Cp4.1LG12g02430.1 Cpe12g00236 236
12 1600765 1601823 + Cp4.1LG12g02360.1 Cpe12g00238 238
12 1606039 1608027 + Cp4.1LG12g02370.1 Cpe12g00239 239
17 676117 679856 - Cp4.1LG17g01050.1 Cpe17g00110 110
17 684771 685856 - Cp4.1LG17g01060.1 Cpe17g00111 111
17 697765 703245 - Cp4.1LG17g01070.1 Cpe17g00112 112
17 703785 709065 - Cp4.1LG17g01120.1 Cpe17g00113 113
17 709539 713666 + Cp4.1LG17g01040.1 Cpe17g00114 114
17 714474 717363 - Cp4.1LG17g01090.1 Cpe17g00115 115
5 5986503 5987747 - CrPI670011_05g006800.1 Cre05g0680 680
5 5996390 5997538 + CrPI670011_05g006820.1 Cre05g0682 682
5 6004867 6008177 + CrPI670011_05g006830.1 Cre05g0683 683
5 6011588 6021917 - CrPI670011_05g006840.1 Cre05g0684 684
5 6023342 6025123 + CrPI670011_05g006850.1 Cre05g0685 685
6 7144544 7146797 - CrPI670011_06g013190.1 Cre06g1319 1319
6 7153025 7154071 - CrPI670011_06g013200.1 Cre06g1320 1320
6 7172415 7179089 - CrPI670011_06g013210.1 Cre06g1321 1321
6 7182220 7187547 - CrPI670011_06g013220.1 Cre06g1322 1322
6 7189681 7193525 + CrPI670011_06g013230.1 Cre06g1323 1323
6 7195888 7197872 - CrPI670011_06g013240.1 Cre06g1324 1324
3 10398188 10400106 - CsaV3_3G013870.1 Csa03g01387 1387
3 10405118 10406714 + CsaV3_3G013880.1 Csa03g01388 1388
3 10409924 10414025 + CsaV3_3G013890.1 Csa03g01389 1389
3 10415111 10425946 - CsaV3_3G013900.1 Csa03g01390 1390
3 10426828 10428347 + CsaV3_3G013910.1 Csa03g01391 1391
3 1782620 1785823 - Hsped.03g01470.1 Hepe03g0147 147
5 64508242 64509928 - Hsped.05g15030.1 Hepe05g1503 1503
5 64526084 64542758 + Hsped.05g15040.1 Hepe05g1504 1504
5 64546973 64550453 - Hsped.05g15050.1 Hepe05g1505 1505
5 64582307 64584070 + Hsped.05g15070.1 Hepe05g1507 1507
12 40641627 40646697 + Lag0016720.1 Lac12g2348 2348
12 40668934 40670010 + Lag0016722.1 Lac12g2350 2350
12 40678509 40679964 + Lag0016724.1 Lac12g2352 2352
11 38713766 38715670 - Maker00032056 Lcy11g1478 1478
11 38721167 38725606 + Maker00031524 Lcy11g1479 1479
11 38749165 38752803 - Maker00031336 Lcy11g1482 1482
13 2315551 2319758 - Maker00023258 Lcy13g0226 226
5 22539354 22540598 - Lsi05G014700.1 Lsi05g01470 1470
5 22549009 22550031 + Lsi05G014710.1 Lsi05g01471 1471
5 22555534 22560175 + Lsi05G014720.1 Lsi05g01472 1472
5 22562656 22573405 - Lsi05G014730.1 Lsi05g01473 1473
5 22574860 22576492 + Lsi05G014750.1 Lsi05g01475 1475
9 21732247 21734714 + Lsi09G013710.1 Lsi09g01371 1371
9 21735629 21740114 - Lsi09G013720.1 Lsi09g01372 1372
9 21744192 21758255 + Lsi09G013730.1 Lsi09g01373 1373
9 21773859 21774908 + Lsi09G013740.1 Lsi09g01374 1374
9 21780871 21785078 + Lsi09G013760.1 Lsi09g01376 1376
2 49493537 49495084 - Sed0019043.1 Sed02g1283 1283
2 49508007 49509276 + Sed0008792.1 Sed02g1284 1284
2 49510426 49526578 - Sed0003410.1 Sed02g1285 1285
2 49527618 49530454 + Sed0019245.1 Sed02g1286 1286
6 4488897 4491737 + Sed0007166.1 Sed06g0516 516
7 6913276 6914758 + Sed0024105.1 Sed07g0944 944
6 69340823 69342116 - Tan0011487.1 Tan06g2090 2090
6 78528734 78533838 + Tan0003594.1 Tan06g2588 2588
10 7601496 7603360 - Tan0015010.1 Tan10g0910 910
10 7616133 7617367 + Tan0010240.1 Tan10g0911 911
10 7624024 7665652 - Tan0021300.1 Tan10g0912 912
10 7672483 7674290 + Tan0017237.1 Tan10g0913 913
5 4032053 4034145 - Vvi5g399 Vvi5g399 399
5 4036865 4054035 + Vvi5g400 Vvi5g400 400
5 4056168 4060179 - Vvi5g401 Vvi5g401 401
5 4060672 4065629 - Vvi5g402 Vvi5g402 402
5 4071956 4073491 + Vvi5g403 Vvi5g403 403
5 4073695 4088090 - Vvi5g404 Vvi5g404 404
5 4088415 4095100 - Vvi5g405 Vvi5g405 405
5 4097240 4111878 + Vvi5g406 Vvi5g406 406
5 4112284 4113778 + Vvi5g407 Vvi5g407 407
5 4115614 4117564 - Vvi5g408 Vvi5g408 408
       

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