Doc-Alignment

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Cucurbitales genomes. We used V.vinifera as a reference, and by comparing homologous gene locus maps and Ks values between V.vinifera and other Cucurbitales, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We created a hierarchical lists of homologous genes using V.vinifera as a reference.
  The relevant gene ids can be obtained from the Cucurbitales blast and match under the Tools module. This link is Cucurbitales blast and match.

Orthogroup analysis platform
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Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g779 Blo01g00303 . Bda03g01096 . Bpe04g00984 . Bma04g01021 Bma05g01254 Cmo08g01030 Cmo17g00140 . Cma14g01842 . Car14g01650 Sed02g0476 . Cpe03g01542 Bhi01g00679 Tan10g0633 Cmetu04g0781 . Hepe05g1689 . Lcy11g1703 Cla06g00697 Cam06g0747 Cec06g0754 Cco06g0765 Clacu06g0738 Cmu06g0722 Cre06g1498 . . . . Lsi05g01767 Csa02g01028 . Cme06g00454 . . . . Bpe05g01110 . . . Sed05g0763 . Cmo14g01884 Cma08g01060 Cma17g00141 Car08g00936 Car17g00123 Cpe12g00120 Cpe17g00216 Bhi12g01562 Tan06g2370 Cmetu05g0428 Lac12g2121 . . Lcy13g0409 Cla05g00412 Cam05g0450 Cec05g0457 Cco05g0458 Clacu05g0447 Cmu05g0424 Cre05g0487 Lsi09g01196 Csa03g01173 Chy06g00435 Cme05g00618
Vvi5g780 . . . . . Bpe14g01278 . . Cmo08g01029 Cmo17g00138 Cma06g01296 Cma14g01843 Car06g01112 Car14g01651 Sed02g1437 Cpe08g00357 Cpe03g01543 Bhi01g00678 Tan10g0631 Cmetu06g1629 . Hepe05g1691 . Lcy11g1704 Cla06g00698 Cam06g0749 Cec06g0755 Cco06g0767 Clacu06g0740 Cmu06g0723 Cre06g1499 Cone14ag0180 Cone15ag0190 Cone7ag0347 Cone4ag0361 Lsi05g01768 Csa02g01027 Chy05g00291 Cme06g00453 Blo02g00771 Blo07g00287 Bda11g00648 Bda13g00040 . . Bma02g00752 . Sed04g2018 Cmo06g01304 Cmo14g01886 Cma08g01059 Cma17g00138 Car08g00935 Car17g00121 . Cpe17g00217 Bhi12g01560 Tan06g2369 Cmetu05g0653 Lac12g2119 Hepe03g0314 . Lcy13g0410 Cla05g00411 Cam05g0449 Cec05g0456 Cco05g0457 Clacu05g0446 Cmu05g0423 Cre05g0486 Lsi09g01195 Csa03g01172 Chy06g00434 Cme05g00619
Vvi5g781 . . . . . . . . . Cmo17g00137 . . . . . . . . . . . . . . Cla06g00699 Cam06g0750 Cec06g0756 Cco06g0768 Clacu06g0741 . Cre06g1500 . . Cone7ag0349 Cone4ag0362 Lsi05g01770 Csa02g01026 Chy05g00290 . . . . . . . . . Sed01g4263 . . Cma08g01058 Cma17g00137 Car08g00934 Car17g00120 Cpe12g00118 Cpe17g00219 Bhi12g01559 Tan06g2368 Cmetu06g0020 Lac12g2118 Hepe03g0315 . Lcy13g0411 Cla05g00409 Cam05g0446 Cec05g0454 Cco05g0454 Clacu05g0443 Cmu05g0421 Cre05g0483 Lsi09g01194 Csa03g01170 Chy06g00432 Cme05g00620
Vvi5g782 . . . . . . . . . . Cma06g01293 . Car06g01110 . . Cpe08g00358 . . . . . . . . . . . . . . . Cone14ag0181 Cone15ag0191 . . Lsi05g01771 . . Cme06g00450 . Blo07g00288 Bda11g00649 . . Bpe13g00537 . Bma06g01617 . Cmo06g01301 . . . . . . . . . . . . . . . . . . . . . . Csa03g01169 . .
Vvi5g783 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi5g784 . . Bda03g01097 . Bpe04g00983 . Bma04g01022 . . . . Cma14g01844 . . . Cpe08g00361 Cpe03g01544 . . . . . . . . . . . . . . Cone14ag0183 Cone15ag0192 . . Lsi05g01774 . . Cme06g00447 . . . . . . . . . Cmo06g01297 Cmo14g01887 . . . . . . . . . . . . . Cla05g00406 Cam05g0443 Cec05g0451 Cco05g0451 Clacu05g0440 Cmu05g0418 Cre05g0480 . Csa03g01166 Chy06g00428 .
Vvi5g785 . . . . . Bpe14g01284 . . . . Cma06g01289 Cma14g01845 Car06g01107 Car14g01653 . Cpe08g00362 Cpe03g01545 . . . . . . . . . . . . . . . . Cone7ag0352 Cone4ag0365 Lsi05g01775 . . . Blo02g00687 . . Bda13g00036 . . . . . Cmo06g01295 Cmo14g01889 . . . . . . . . . . . . . Cla05g00405 Cam05g0442 Cec05g0449 Cco05g0450 Clacu05g0439 Cmu05g0417 Cre05g0479 . Csa03g01165 Chy06g00427 .
Vvi5g786 . . . . . . . . . . . Cma14g01846 . Car14g01654 . . Cpe03g01546 . . . . . . . . . . . . . . . . Cone7ag0353 . Lsi05g01776 . . Cme06g00446 Blo02g00686 . . . . . . . . . Cmo14g01890 . . . . . . . . . . . . . Cla05g00404 Cam05g0441 Cec05g0448 Cco05g0449 Clacu05g0438 Cmu05g0416 Cre05g0478 . Csa03g01164 Chy06g00426 .
Vvi5g787 . . Bda03g01098 Bda08g00001 Bpe04g00982 Bpe14g01285 Bma04g01023 . Cmo08g01028 Cmo17g00136 . . . . . . . . . . . . . . Cla06g00700 Cam06g0751 Cec06g0757 Cco06g0769 Clacu06g0742 Cmu06g0725 Cre06g1501 . . . . . Csa02g01025 Chy05g00289 . Blo02g00684 . . Bda13g00035 Bpe05g01111 . Bma02g00748 . Sed09g0214 . . Cma08g01057 Cma17g00133 Car08g00933 Car17g00119 . . Bhi12g01558 Tan06g2367 Cmetu05g1475 . . . Lcy13g0413 . . . . . . . Lsi09g01193 . . Cme05g00621
Vvi5g788 Blo01g00304 . . Bda08g00002 . Bpe14g01286 . Bma05g01256 . Cmo17g00135 . Cma14g01847 . Car14g01655 . . Cpe03g01547 . . . . . . . Cla06g00701 Cam06g0752 Cec06g0758 Cco06g0770 Clacu06g0743 Cmu06g0726 Cre06g1503 Cone14ag0184 Cone15ag0193 . . Lsi05g01777 Csa02g01024 Chy05g00286 Cme06g00445 . . . Bda13g00034 . . Bma02g00747 . . . Cmo14g01891 . Cma17g00132 . Car17g00118 Cpe12g00116 . . . . . . . . Cla05g00403 Cam05g0439 Cec05g0447 Cco05g0447 Clacu05g0436 Cmu05g0415 Cre05g0477 Lsi09g01192 Csa03g01162 Chy06g00425 Cme05g00622
   
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Gene_GFF

Select Chromosome Start End Strand Old_gene Gene Num
3 10999400 11001942 - Bda017140.1 Bda03g01096 1096
3 11017819 11025763 + Bda033513 Bda03g01097 1097
3 11025773 11027419 + Bda017142.1 Bda03g01098 1098
8 2000 3631 + Bda024389.1 Bda08g00001 1
8 5105 9567 + Bda024390.1 Bda08g00002 2
11 6436698 6437883 + Bda005394.1 Bda11g00648 648
11 6438349 6440467 - Bda005395.1 Bda11g00649 649
13 564099 564890 - Bda000876.1 Bda13g00034 34
13 569190 570485 - Bda000877.1 Bda13g00035 35
13 581807 584788 - Bda000878.1 Bda13g00036 36
13 609924 610623 - Bda000882.1 Bda13g00040 40
1 12689190 12691393 - XM_039035718.1 Bhi01g00678 678
1 12694486 12697343 + XM_039035710.1 Bhi01g00679 679
12 50786798 50789278 - XM_039051021.1 Bhi12g01558 1558
12 50799227 50800047 + XM_039019830.1 Bhi12g01559 1559
12 50801917 50803906 - XM_039019829.1 Bhi12g01560 1560
12 50828226 50832477 + XM_039019365.1 Bhi12g01562 1562
1 3726778 3735337 - BLOR00303 Blo01g00303 303
1 3748993 3755950 + BLOR00304 Blo01g00304 304
2 20080764 20090606 - BLOR10414 Blo02g00684 684
2 20106841 20108286 + BLOR10416 Blo02g00686 686
2 20108871 20111021 - BLOR10417 Blo02g00687 687
2 26049284 26052596 + BLOR10501 Blo02g00771 771
7 3350530 3358653 + BLOR18219 Blo07g00287 287
7 3359520 3361353 - BLOR18220 Blo07g00288 288
2 38534923 38536162 - Bma015449.1 Bma02g00747 747
2 38538406 38539704 - Bma015450.1 Bma02g00748 748
2 38715085 38716087 - Bma015456.1 Bma02g00752 752
4 17943472 17946593 - Bma019637.1 Bma04g01021 1021
4 17949022 17962233 + Bma031126 Bma04g01022 1022
4 17962237 17963874 + Bma019638.1 Bma04g01023 1023
5 51879013 51881360 - Bma022445.1 Bma05g01254 1254
5 51904372 51906017 + Bma022447.1 Bma05g01256 1256
6 52297847 52299855 - Bma024731.1 Bma06g01617 1617
4 6808945 6810576 - Bpe015648.1 Bpe04g00982 982
4 6811092 6812959 - Bpe015649.1 Bpe04g00983 983
4 6823372 6824970 + Bpe015651.1 Bpe04g00984 984
5 23464305 23466616 - Bpe018526.1 Bpe05g01110 1110
5 23470758 23472389 + Bpe018527.1 Bpe05g01111 1111
13 12695148 12697218 + Bpe010241.1 Bpe13g00537 537
14 9674070 9675174 + Bpe014635.1 Bpe14g01278 1278
14 9711304 9714285 + Bpe014641.1 Bpe14g01284 1284
14 9734507 9735805 + Bpe014642.1 Bpe14g01285 1285
14 9743782 9745017 + Bpe014643.1 Bpe14g01286 1286
5 3976073 3996877 - CaPI482276_05g004390.1 Cam05g0439 439
5 4002141 4004330 + CaPI482276_05g004410.1 Cam05g0441 441
5 4004896 4007907 - CaPI482276_05g004420.1 Cam05g0442 442
5 4010376 4012854 - CaPI482276_05g004430.1 Cam05g0443 443
5 4021779 4025145 + CaPI482276_05g004460.1 Cam05g0446 446
5 4030666 4031964 - CaPI482276_05g004490.1 Cam05g0449 449
5 4037607 4039999 + CaPI482276_05g004500.1 Cam05g0450 450
6 10071665 10075487 - CaPI482276_06g007470.1 Cam06g0747 747
6 10084374 10085715 + CaPI482276_06g007490.1 Cam06g0749 749
6 10088308 10088619 - CaPI482276_06g007500.1 Cam06g0750 750
6 10113998 10115686 + CaPI482276_06g007510.1 Cam06g0751 751
6 10128419 10130341 + CaPI482276_06g007520.1 Cam06g0752 752
6 8309294 8319403 - Carg06251-RA Car06g01107 1107
6 8328085 8330901 + Carg06247-RA Car06g01110 1110
6 8335962 8337186 - Carg06245-RA Car06g01112 1112
8 6263482 6265050 - Carg10991-RA Car08g00933 933
8 6265687 6265998 + Carg10990-RA Car08g00934 934
8 6268178 6269655 - Carg10989-RA Car08g00935 935
8 6271381 6276753 + Carg10987-RA Car08g00936 936
14 13198171 13200265 - Carg16537-RA Car14g01650 1650
14 13201745 13202949 + Carg16536-RA Car14g01651 1651
14 13204521 13211657 + Carg16534-RA Car14g01653 1653
14 13211835 13214068 - Carg16533-RA Car14g01654 1654
14 13216158 13219021 + Carg16532-RA Car14g01655 1655
17 742473 745452 - Carg10114-RA Car17g00118 118
17 749739 751304 - Carg10113-RA Car17g00119 119
17 752430 752741 + Carg10112-RA Car17g00120 120
17 754250 756064 - Carg10111-RA Car17g00121 121
17 760197 762596 + Carg10109-RA Car17g00123 123
5 3651207 3653180 - CcPI632755_05g004470.1 Cco05g0447 447
5 3658062 3660260 + CcPI632755_05g004490.1 Cco05g0449 449
5 3660843 3663822 - CcPI632755_05g004500.1 Cco05g0450 450
5 3666342 3668754 - CcPI632755_05g004510.1 Cco05g0451 451
5 3682274 3685654 + CcPI632755_05g004540.1 Cco05g0454 454
5 3691269 3696154 - CcPI632755_05g004570.1 Cco05g0457 457
5 3696230 3698625 + CcPI632755_05g004580.1 Cco05g0458 458
6 8762582 8766437 - CcPI632755_06g007650.1 Cco06g0765 765
6 8775820 8777161 + CcPI632755_06g007670.1 Cco06g0767 767
6 8779731 8780042 - CcPI632755_06g007680.1 Cco06g0768 768
6 8827292 8828980 + CcPI632755_06g007690.1 Cco06g0769 769
6 8841941 8843850 + CcPI632755_06g007700.1 Cco06g0770 770
5 3648370 3650583 - CePI673135_05g004470.1 Cec05g0447 447
5 3655596 3657791 + CePI673135_05g004480.1 Cec05g0448 448
5 3658434 3661378 - CePI673135_05g004490.1 Cec05g0449 449
5 3663882 3666293 - CePI673135_05g004510.1 Cec05g0451 451
5 3675329 3678700 + CePI673135_05g004540.1 Cec05g0454 454
5 3684278 3688624 - CePI673135_05g004560.1 Cec05g0456 456
5 3688714 3691035 + CePI673135_05g004570.1 Cec05g0457 457
6 8797600 8801435 - CePI673135_06g007540.1 Cec06g0754 754
6 8815306 8816647 + CePI673135_06g007550.1 Cec06g0755 755
6 8819148 8819459 - CePI673135_06g007560.1 Cec06g0756 756
6 8841644 8843332 + CePI673135_06g007570.1 Cec06g0757 757
6 8865540 8867454 + CePI673135_06g007580.1 Cec06g0758 758
5 2811764 2813348 - Chy5G093320.1 Chy05g00286 286
5 2829499 2831184 - Chy5G093350.1 Chy05g00289 289
5 2839009 2840465 + Chy5G093360.1 Chy05g00290 290
5 2842035 2843224 - Chy5G093370.1 Chy05g00291 291
6 2892452 2896187 - Chy6G109530.1 Chy06g00425 425
6 2901325 2903347 + Chy6G109540.1 Chy06g00426 426
6 2904090 2907341 - Chy6G109550.1 Chy06g00427 427
6 2909506 2911675 - Chy6G109560.1 Chy06g00428 428
6 2921185 2924200 + Chy6G109600.1 Chy06g00432 432
6 2929431 2930255 - Chy6G109620.1 Chy06g00434 434
6 2932827 2935257 + Chy6G109630.1 Chy06g00435 435
5 3707016 3708988 - ClG42_05g0043600.10 Clacu05g0436 436
5 3714239 3716419 + ClG42_05g0043800.10 Clacu05g0438 438
5 3717003 3720016 - ClG42_05g0043900.10 Clacu05g0439 439
5 3722496 3724906 - ClG42_05g0044000.10 Clacu05g0440 440
5 3733763 3737082 + ClG42_05g0044300.10 Clacu05g0443 443
5 3742659 3743941 - ClG42_05g0044600.10 Clacu05g0446 446
5 3747472 3749863 + ClG42_05g0044700.10 Clacu05g0447 447
6 8638952 8642820 - ClG42_06g0073800.10 Clacu06g0738 738
6 8651821 8653162 + ClG42_06g0074000.10 Clacu06g0740 740
6 8655742 8656053 - ClG42_06g0074100.10 Clacu06g0741 741
6 8678037 8679725 + ClG42_06g0074200.10 Clacu06g0742 742
6 8692300 8694223 + ClG42_06g0074300.10 Clacu06g0743 743
5 3654851 3677039 - ClCG05G003940.2 Cla05g00403 403
5 3682151 3684774 + ClCG05G003960.2 Cla05g00404 404
5 3684683 3688186 - ClCG05G003970.2 Cla05g00405 405
5 3688136 3694444 - ClCG05G003980.2 Cla05g00406 406
5 3703133 3707788 + ClCG05G004000.1 Cla05g00409 409
5 3712885 3714167 - ClCG05G004010.2 Cla05g00411 411
5 3717899 3720290 + ClCG05G004020.2 Cla05g00412 412
6 8858589 8862743 - ClCG06G007260.1 Cla06g00697 697
6 8876194 8878151 + ClCG06G007270.1 Cla06g00698 698
6 8880390 8880701 - ClCG06G007273.1 Cla06g00699 699
6 8903841 8905529 + ClCG06G007277.1 Cla06g00700 700
6 8917928 8920454 + ClCG06G007280.2 Cla06g00701 701
6 8572392 8582822 - CmaCh06G012890.1 Cma06g01289 1289
6 8589954 8592264 + CmaCh06G012930.1 Cma06g01293 1293
6 8598574 8600355 - CmaCh06G012960.1 Cma06g01296 1296
8 6625379 6626947 - CmaCh08G010570.1 Cma08g01057 1057
8 6627624 6627935 + CmaCh08G010580.1 Cma08g01058 1058
8 6630418 6631589 - CmaCh08G010590.1 Cma08g01059 1059
8 6632901 6638942 + CmaCh08G010600.1 Cma08g01060 1060
14 13132412 13135090 - CmaCh14G018420.1 Cma14g01842 1842
14 13136511 13137853 + CmaCh14G018430.1 Cma14g01843 1843
14 13139202 13141445 + CmaCh14G018440.1 Cma14g01844 1844
14 13143826 13146438 + CmaCh14G018450.1 Cma14g01845 1845
14 13146436 13149043 - CmaCh14G018460.1 Cma14g01846 1846
14 13150410 13162062 + CmaCh14G018470.1 Cma14g01847 1847
17 688600 692266 - CmaCh17G001320.1 Cma17g00132 132
17 695812 697380 - CmaCh17G001330.1 Cma17g00133 133
17 698394 698705 + CmaCh17G001370.1 Cma17g00137 137
17 700115 702190 - CmaCh17G001380.1 Cma17g00138 138
17 704611 708477 + CmaCh17G001410.1 Cma17g00141 141
5 6399890 6403839 - MELO3C023042.2.1 Cme05g00618 618
5 6424771 6426879 + MELO3C023043.2.1 Cme05g00619 619
5 6428649 6429601 - MELO3C023044.2.1 Cme05g00620 620
5 6440886 6442681 + MELO3C023045.2.1 Cme05g00621 621
5 6474080 6475976 + MELO3C023046.2.1 Cme05g00622 622
6 2840412 2843371 - MELO3C006371.2.1 Cme06g00445 445
6 2847422 2850315 + MELO3C006372.2.1 Cme06g00446 446
6 2850612 2858505 - MELO3C006373.2.1 Cme06g00447 447
6 2867200 2869656 + MELO3C006377.2.1 Cme06g00450 450
6 2875042 2877057 - MELO3C006379.2.1 Cme06g00453 453
6 2878747 2881563 + MELO3C006380.2.1 Cme06g00454 454
4 5410133 5413809 - PI0007522.1 Cmetu04g0781 781
5 17812715 17815718 + PI0026014.1 Cmetu05g0428 428
5 17790222 17792099 - PI0011521.1 Cmetu05g0653 653
5 17773734 17775419 - PI0019161.1 Cmetu05g1475 1475
6 3090342 3090644 + PI0025079.1 Cmetu06g0020 20
6 3095338 3097257 - PI0025800.1 Cmetu06g1629 1629
6 9758346 9763934 - CmoCh06G012950.1 Cmo06g01295 1295
6 9765368 9769085 - CmoCh06G012970.1 Cmo06g01297 1297
6 9777616 9780573 + CmoCh06G013010.1 Cmo06g01301 1301
6 9784938 9786630 - CmoCh06G013040.1 Cmo06g01304 1304
8 6693691 6695181 - CmoCh08G010280.1 Cmo08g01028 1028
8 6698507 6700282 - CmoCh08G010290.1 Cmo08g01029 1029
8 6701397 6705337 + CmoCh08G010300.1 Cmo08g01030 1030
14 14112318 14115091 - CmoCh14G018840.1 Cmo14g01884 1884
14 14116311 14117633 + CmoCh14G018860.1 Cmo14g01886 1886
14 14119056 14121650 + CmoCh14G018870.1 Cmo14g01887 1887
14 14122236 14126229 + CmoCh14G018890.1 Cmo14g01889 1889
14 14126284 14128579 - CmoCh14G018900.1 Cmo14g01890 1890
14 14130454 14133360 + CmoCh14G018910.1 Cmo14g01891 1891
17 780011 783189 - CmoCh17G001350.1 Cmo17g00135 135
17 787133 788698 - CmoCh17G001360.1 Cmo17g00136 136
17 789781 790092 + CmoCh17G001370.1 Cmo17g00137 137
17 791609 793638 - CmoCh17G001380.1 Cmo17g00138 138
17 796557 800844 + CmoCh17G001400.1 Cmo17g00140 140
5 3524334 3545077 - CmPI595203_05g004150.1 Cmu05g0415 415
5 3550351 3552535 + CmPI595203_05g004160.1 Cmu05g0416 416
5 3553119 3556131 - CmPI595203_05g004170.1 Cmu05g0417 417
5 3558601 3561010 - CmPI595203_05g004180.1 Cmu05g0418 418
5 3569862 3573204 + CmPI595203_05g004210.1 Cmu05g0421 421
5 3578778 3580060 - CmPI595203_05g004230.1 Cmu05g0423 423
5 3583609 3586000 + CmPI595203_05g004240.1 Cmu05g0424 424
6 8457260 8461104 - CmPI595203_06g007220.1 Cmu06g0722 722
6 8470087 8471428 + CmPI595203_06g007230.1 Cmu06g0723 723
6 8496322 8498010 + CmPI595203_06g007250.1 Cmu06g0725 725
6 8510552 8512475 + CmPI595203_06g007260.1 Cmu06g0726 726
4 1641810 1643158 + Conep04aG0037300.1 Cone4ag0361 361
4 1645679 1646314 - Conep04aG0037400.1 Cone4ag0362 362
4 1651413 1654299 + Conep04aG0037700.1 Cone4ag0365 365
7 1515792 1517285 + Conep07aG0035500.1 Cone7ag0347 347
7 1523522 1524154 - Conep07aG0035700.1 Cone7ag0349 349
7 1528865 1531709 + Conep07aG0036000.1 Cone7ag0352 352
7 1531802 1533837 - Conep07aG0036100.1 Cone7ag0353 353
14 838995 840585 + Conep14aG0018400.1 Cone14ag0180 180
14 841419 842704 - Conep14aG0018500.1 Cone14ag0181 181
14 845196 846770 + Conep14aG0018700.1 Cone14ag0183 183
14 848627 850452 + Conep14aG0018800.1 Cone14ag0184 184
15 898991 900477 + Conep15aG0019400.1 Cone15ag0190 190
15 901295 903068 - Conep15aG0019500.1 Cone15ag0191 191
15 904939 906463 + Conep15aG0019600.1 Cone15ag0192 192
15 908646 910539 + Conep15aG0019700.1 Cone15ag0193 193
3 12010073 12013382 - Cp4.1LG03g09590.1 Cpe03g01542 1542
3 12014350 12016080 + Cp4.1LG03g09630.1 Cpe03g01543 1543
3 12017194 12019908 + Cp4.1LG03g09660.1 Cpe03g01544 1544
3 12021189 12025185 + Cp4.1LG03g09690.1 Cpe03g01545 1545
3 12024286 12027284 - Cp4.1LG03g09580.1 Cpe03g01546 1546
3 12029176 12031930 + Cp4.1LG03g09640.1 Cpe03g01547 1547
8 2216744 2218181 + Cp4.1LG08g03230.1 Cpe08g00357 357
8 2219326 2225413 - Cp4.1LG08g03140.1 Cpe08g00358 358
8 2232891 2237062 + Cp4.1LG08g03180.1 Cpe08g00361 361
8 2237932 2243218 + Cp4.1LG08g03210.1 Cpe08g00362 362
12 743413 745279 - Cp4.1LG12g01240.1 Cpe12g00116 116
12 751873 752184 + Cp4.1LG12g01150.1 Cpe12g00118 118
12 757897 763669 + Cp4.1LG12g01100.1 Cpe12g00120 120
17 1384154 1390638 - Cp4.1LG17g02220.1 Cpe17g00216 216
17 1392125 1393329 + Cp4.1LG17g02020.1 Cpe17g00217 217
17 1395779 1396090 - Cp4.1LG17g02320.1 Cpe17g00219 219
5 4314260 4329829 - CrPI670011_05g004770.1 Cre05g0477 477
5 4340251 4342462 + CrPI670011_05g004780.1 Cre05g0478 478
5 4343048 4346057 - CrPI670011_05g004790.1 Cre05g0479 479
5 4348559 4350906 - CrPI670011_05g004800.1 Cre05g0480 480
5 4359981 4363302 + CrPI670011_05g004830.1 Cre05g0483 483
5 4368859 4370142 - CrPI670011_05g004860.1 Cre05g0486 486
5 4373823 4376213 + CrPI670011_05g004870.1 Cre05g0487 487
6 9606358 9610198 - CrPI670011_06g014980.1 Cre06g1498 1498
6 9619331 9620672 + CrPI670011_06g014990.1 Cre06g1499 1499
6 9623265 9623576 - CrPI670011_06g015000.1 Cre06g1500 1500
6 9663254 9664942 + CrPI670011_06g015010.1 Cre06g1501 1501
6 9677773 9679697 + CrPI670011_06g015030.1 Cre06g1503 1503
2 9951727 9954895 - CsaV3_2G012400.1 Csa02g01024 1024
2 9965380 9967065 - CsaV3_2G012410.1 Csa02g01025 1025
2 9971297 9973194 + CsaV3_2G012420.1 Csa02g01026 1026
2 9973611 9976082 - CsaV3_2G012430.1 Csa02g01027 1027
2 9983066 9987072 + CsaV3_2G012440.1 Csa02g01028 1028
3 9091821 9094990 - CsaV3_3G011620.1 Csa03g01162 1162
3 9098028 9102280 + CsaV3_3G011640.1 Csa03g01164 1164
3 9101022 9104852 - CsaV3_3G011650.1 Csa03g01165 1165
3 9105763 9108164 - CsaV3_3G011660.1 Csa03g01166 1166
3 9117477 9119621 + CsaV3_3G011690.1 Csa03g01169 1169
3 9120193 9120507 + CsaV3_3G011700.1 Csa03g01170 1170
3 9124857 9126903 - CsaV3_3G011720.1 Csa03g01172 1172
3 9128884 9132057 + CsaV3_3G011730.1 Csa03g01173 1173
3 4310349 4312466 + Hsped.03g03140.1 Hepe03g0314 314
3 4315663 4315974 - Hsped.03g03150.1 Hepe03g0315 315
5 66812754 66815794 - Hsped.05g16890.1 Hepe05g1689 1689
5 66825484 66827357 + Hsped.05g16910.1 Hepe05g1691 1691
12 38364863 38365174 + Lag0016490.1 Lac12g2118 2118
12 38367947 38369249 - Lag0016491.1 Lac12g2119 2119
12 38382815 38386427 + Lag0016493.1 Lac12g2121 2121
11 40911249 40917055 - Maker00032026 Lcy11g1703 1703
11 40919694 40921987 + Maker00031301 Lcy11g1704 1704
13 4720262 4724449 - Maker00023192 Lcy13g0409 409
13 4727582 4729360 + Maker00023408 Lcy13g0410 410
13 4730988 4732415 - Maker00023927 Lcy13g0411 411
13 4736696 4738306 + Maker00023271 Lcy13g0413 413
5 25028020 25031073 - Lsi05G017670.1 Lsi05g01767 1767
5 25035007 25036439 + Lsi05G017680.1 Lsi05g01768 1768
5 25043321 25045795 - Lsi05G017700.1 Lsi05g01770 1770
5 25045799 25049010 - Lsi05G017710.1 Lsi05g01771 1771
5 25057286 25060950 + Lsi05G017740.1 Lsi05g01774 1774
5 25062717 25066367 + Lsi05G017750.1 Lsi05g01775 1775
5 25066456 25069245 - Lsi05G017760.1 Lsi05g01776 1776
5 25073377 25096293 + Lsi05G017770.1 Lsi05g01777 1777
9 19160403 19162556 - Lsi09G011920.1 Lsi09g01192 1192
9 19185727 19187415 - Lsi09G011930.1 Lsi09g01193 1193
9 19192160 19192471 + Lsi09G011940.1 Lsi09g01194 1194
9 19196585 19198527 - Lsi09G011950.1 Lsi09g01195 1195
9 19205499 19209905 + Lsi09G011960.1 Lsi09g01196 1196
1 70916172 70916794 + Sed0016490.1 Sed01g4263 4263
2 42058352 42063020 - Sed0017910.1 Sed02g0476 476
2 50470129 50472088 - Sed0011206.1 Sed02g1437 1437
4 34615997 34618228 + Sed0017841.2 Sed04g2018 2018
5 5972428 5975588 + Sed0014817.1 Sed05g0763 763
9 1720135 1721574 - Sed0005987.1 Sed09g0214 214
6 75749016 75750957 - Tan0013549.1 Tan06g2367 2367
6 75757119 75758630 + Tan0019581.1 Tan06g2368 2368
6 75759741 75761751 - Tan0022791.1 Tan06g2369 2369
6 75769483 75782065 + Tan0003593.1 Tan06g2370 2370
10 5150755 5152430 - Tan0009254.1 Tan10g0631 631
10 5156582 5159503 + Tan0004926.2 Tan10g0633 633
5 9307253 9318342 - Vvi5g779 Vvi5g779 779
5 9330146 9331928 + Vvi5g780 Vvi5g780 780
5 9334527 9334821 - Vvi5g781 Vvi5g781 781
5 9346599 9353285 - Vvi5g782 Vvi5g782 782
5 9358203 9364678 + Vvi5g783 Vvi5g783 783
5 9396154 9400042 + Vvi5g784 Vvi5g784 784
5 9402568 9419328 + Vvi5g785 Vvi5g785 785
5 9421141 9424813 - Vvi5g786 Vvi5g786 786
5 9426103 9432904 + Vvi5g787 Vvi5g787 787
5 9458703 9461802 + Vvi5g788 Vvi5g788 788
       

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